Chionomys nivalis (European snow vole): 130883354
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Entry
130883354 CDS
T11437
Symbol
Sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cnl01009
]
130883354 (Sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnl03021
]
130883354 (Sfpq)
03041 Spliceosome [BR:
cnl03041
]
130883354 (Sfpq)
Protein phosphatases and associated proteins [BR:
cnl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130883354 (Sfpq)
Transcription machinery [BR:
cnl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130883354 (Sfpq)
Spliceosome [BR:
cnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130883354 (Sfpq)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
130883354
NCBI-ProteinID:
XP_057639591
LinkDB
All DBs
Position
11:complement(25184902..25201612)
Genome browser
AA seq
702 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGGPKPPIPP
PPPHQQQQQPPPQQPPPQQPPPHQQPPPHQPPHQQPPPPPQDSSKPVVPPGPGAAPGVSP
APPPAGSAPPANPPATGATPGPGPAPTPPPAVTSTAPGPPPPSTPTSGVATTPPQTGGPP
PPPASGAGPGPKQGPGPGPGGPKGGKMPGGPKPGGGPGMGAPGGHPKPPHRGGGEPRGGR
QHHPPYHQQHHQGPPPGAPAARTEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLP
ADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVR
FATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAAR
KAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGT
FEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEE
LRRMEELHSQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRMGYMDP
RERDMRMGGGGTMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTE
RFGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatcggttccggagtcgcggcggtggcggtggcggctttcaccggcgtgga
ggaggcggtggacgcggcggccttcatgacttccgctcgccgccgcccggcatgggcctc
aaccagaaccgcggccccatgggcccgggccctggcggcccgaagccaccgatcccgcct
ccgcctccgcaccagcagcagcagcagcccccgccgcagcagcccccgccgcagcaaccc
ccgccgcaccagcagccgccgccgcaccagccgccccatcagcagcccccgcctccgccg
caggactcgtccaagcccgtcgtccccccaggccccggcgctgcgcccggagtgagccct
gcgccgcctcccgccggctcggccccgcccgccaatcccccggccaccggcgccacgccg
ggcccgggtcccgctccgaccccgccgcccgccgtcacatccactgcccccggaccgccc
ccgccatcgacgccgaccagcggagtggcgactaccccgccacagaccggcggccctccg
cctccacccgcctctggcgccgggcccgggcctaagcaaggcccaggcccgggcccgggc
ggcccgaaaggcggcaaaatgcctggtgggcctaagcccggaggtggcccgggcatgggc
gctcccggtggccacccgaagccacctcaccggggtggcggggagccccgcgggggccgc
cagcaccacccgccctaccaccagcagcaccaccaggggccccctcccggagcgccggca
gcccgcacagaagaaaagatatccgactcagagggatttaaagccaatttgtctctcttg
cggaggcctggagaaaaaacttacacacaacgctgtcgtttatttgtggggaacctacct
gctgatatcacagaggatgagttcaaaagactgtttgctaaatacggagaacccggagaa
gtttttatcaacaaaggcaaagggttcgggttcattaaacttgaatctagagccttggct
gaaatcgccaaagctgaacttgatgatactcccatgagaggtagacagcttcgggttcgc
tttgccacacatgctgcagccctttctgttcggaatctttcaccctatgtttctaatgaa
ctgttggaagaagcctttagccagtttggtcctattgaaagggctgttgtaattgtggat
gatcgtggaagatctacagggaaagggattgttgaatttgcttcaaagccagcagcaaga
aaagcatttgaaagatgcagtgaaggtgttttcctactgacaacgactcctcgcccagtc
attgtggaacctcttgaacagttagatgatgaagatggtcttcctgaaaaactggcccag
aagaatccaatgtatcaaaaggagagagaaacacctcctcgttttgctcagcatggcaca
tttgagtatgaatattctcaacgatggaagtccttagatgaaatggaaaaacagcaaagg
gaacaagttgagaaaaacatgaaagatgcaaaagataaattggaaagtgaaatggaagat
gcttaccatgagcatcaagcaaatcttttgcgccaagatttgatgagacgccaggaagaa
ttgaggcgcatggaagaacttcacagccaagaaatgcagaaacgtaaagaaatgcagttg
aggcaagaggaggaacggcgtagaagagaggaagagatgatgatacgccaaagagagatg
gaagaacaaatgagacgccaacgagaagaaagttacagcaggatgggctacatggaccca
agagaaagagacatgagaatgggtggtggtggaacaatgaacatgggagatccctatggt
tcaggaggccagaaatttccacctctaggtggtggtggtggcataggttatgaagctaat
cctggagttccaccagcaaccatgagtggttccatgatgggaagcgacatgcgtactgag
cgctttgggcagggaggtgcgggtcctgtgggtggacagggtcctagaggaatgggtcct
ggaactccagcagggtacggtagagggcgagaagagtatgaagggccaaacaagaaaccc
cgattttag
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