Chionomys nivalis (European snow vole): 130883369
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Entry
130883369 CDS
T11437
Symbol
Arid1a
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03082
ATP-dependent chromatin remodeling
cnl04714
Thermogenesis
cnl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130883369 (Arid1a)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
130883369 (Arid1a)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
130883369 (Arid1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnl03000
]
130883369 (Arid1a)
03021 Transcription machinery [BR:
cnl03021
]
130883369 (Arid1a)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130883369 (Arid1a)
Transcription factors [BR:
cnl03000
]
Eukaryotic type
Helix-turn-helix
ARID
130883369 (Arid1a)
Transcription machinery [BR:
cnl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130883369 (Arid1a)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130883369 (Arid1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130883369
NCBI-ProteinID:
XP_057639645
LinkDB
All DBs
Position
11:18786386..18866813
Genome browser
AA seq
2279 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQQQREEAGGEAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGGVGGAGGGPGAEPDLKNSNGNAGPRPALNNNLPEP
PGGGGGGNSDGVGAPPHSAAAALPPPAYGFGPPYGRSPSAVAAAAAAVFHQQHGGQQSPG
LAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPG
SGAATAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTS
PSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAASGGAQQRSHHAPM
SPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPY
GSQTPQRYPMTMQGRAQSAMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQ
PPYSQQPPSQTPHAQPSYQQQPQTQQPQLQSSQPPYSQQPSQTPHQQSPTPYPSQQSTAQ
QHPQSQPPYSQQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQPQQSQQTAYSQQRFPPPQ
ELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGV
STSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPG
NQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYTSPQPGSALSPRQPSGGQM
HTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPNAGMAGSMNPMGAGGQM
HGQPGIPPYGTLPPGRMTHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQESAVAM
HVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNSAGM
AASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEPERK
MWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELATNLN
VGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGSGSM
QGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPTFQK
RNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYS
RAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSTPDSGMYSP
SRYPPQQQQQQQRHDSYGNQFSTQGTPSSSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAK
RHEGEMYSVPYSTGQGQPQQQQLPAAQSQSASQQQAAQPSPQQDVYNQYSNAYPAAATAA
TERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRN
DMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSAPVP
PMTRPPPSNYQPPPSMQNHIPQVSSPAPLVRPMENRTSPSKSPFLHSGMKMQKAGPPVPA
SHIAPTPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSGLLA
ESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQR
TLLDPGRFSKVSSPAPTEEEDEELLDSKLEEEEEVVENDEEMAFLGKDKPASENSEEKLV
SKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKVELL
PSRPYVPCPTPPRKHLTTVEGTQGTAEQEGPPPDALPEKRITATMDDMLSTRSSTLTDEG
TKSAEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSN
TIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCDKV
EWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTL
GPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREM
AVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQNPPFEPT
SVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagccgagcagcagcagcagcagcgggaggaggcggggggcgaggcg
gcggcagcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cccgccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaat
gggggtggcggcggcggcgttggaggagccggcggcgggcccggcgcggagccggacctg
aagaactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcccggagccg
cccggcggcggcggcggcggtaacagcgacggggtgggggcgcctcctcactcagctgcg
gccgccctgccgccccccgcctacggcttcgggccaccctacggccggagcccgtctgcc
gtcgccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggc
ctggcagcgctgcagagcggcggcggcgggggcctggagccctacgccgggccccagcag
aactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcgaccgccggctccaagccgcctccctcctccagcgcctctgcctcctcg
tcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctcagcg
gccggcgggggaactccccagcccaccgccacccccaccctcaaccaactgctcacgtcg
cccagctcggcccggggctaccagggctaccccgggggcgactacggcggcgggccccag
gacgggggcgcgggcaagggcccggcggacatggcctcgcagtgctggggggctgcggcg
gcggcggcggcagcggccgcctcgggaggggcccaacaaaggagccaccacgcgcccatg
agccccgggagcagcggcggcggggggcagccgctcgcccggacccctcagccatccagt
ccaatggatcagatgggaaagatgagacctcagccgtatggtgggactaacccatactca
caacaacagggacctccttctggaccgcaacaaggacatgggtacccgggccagccatat
gggtcccagactccacagcggtacccaatgaccatgcagggccgggctcagagtgccatg
ggcggcctctcttatgcacagcagattccaccttatggacagcaaggccccagtggttat
ggtcagcagggccagactccatactataaccagcaaagtcctcatccccagcaacaacag
ccaccttactcccagcaaccaccatcccagacccctcatgcgcagccttcgtatcagcag
cagccgcagactcagcaaccacagcttcagtcctctcagcctccgtattcccagcagcca
tcccagactccacatcagcagtccccaactccgtacccctcccagcagtccactgcacaa
cagcacccccagagccagcccccctactcacaacaaccacaggcacagtctccctaccag
cagcagcaacctcagcagccagcatcctcgacgctctcccagcaggctgcatatcctcag
ccccagcctcagcagtcccagcaaactgcctactcccagcagcgcttccctccaccacag
gagctttctcaagattcatttggatctcaggcatcctcagccccctcaatgacctccagt
aaaggagggcaagaagatatgaacctgagtcttcagtcgagaccctccagcttgcctgat
ctctctggttcaatagatgatctccccatggggacagaaggagctctgagtcctggcgtg
agcacatcagggatttccagcagccaaggagagcagagtaatccagctcagtctcctttt
tctcctcatacctcccctcatttgcctggcatccgaggcccctccccgtcccctgttggc
tctcctgccagtgtcgctcagtctcgctcaggaccactctcgcctgctgcagtgccaggc
aaccagatgccacctcggccacccagtggccaatcggacagcatcatgcatccttccatg
aaccaatcaagcattgcccaagatcgaggttatatgcagaggaaccctcagatgccccag
tacacttcccctcagcccggctcggccttatctccacgtcagccttctggaggacagatg
cacacaggcatgggctcctaccagcagaactccatggggagctatggcccccaggggagt
cagtatgggccacaaggaggctaccccaggcagcctaactataatgcattgcccaatgcc
aactaccccaatgcaggcatggctggaagtatgaaccctatgggtgctggaggtcaaatg
cacgggcaacctggaatcccaccttatggcacacttcctccagggagaatgactcatgca
tcaatgggcaacaggccttatggccctaatatggccaacatgccacctcaggttgggtca
gggatgtgtcccccaccagggggaatgaaccggaaaactcaagaatctgctgttgccatg
catgttgctgccaactctatccaaaacaggccaccaggctacccgaatatgaatcaaggg
ggcatgatgggaactggacctccctatggacaggggattaatagtatggctggcatgatc
aaccctcagggacccccatatcctatgggtgggaccatggccaacaattcagcagggatg
gcagccagcccagagatgatgggccttggggatgttaagttaactccagccacaaaaatg
aacaacaaggcagatgggacacccaagactgaatccaaatctaagaaatccagctcttct
actacaaccaatgagaagattaccaagttgtatgagctgggtggtgagccagagaggaag
atgtgggtggaccgctacctggccttcacagaggaaaaggccatgggtatgactaatctg
cctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtgaaggagatt
ggtggattgactcaggtcaacaagaacaaaaaatggcgagaacttgcaaccaacctcaat
gtgggtacatcaagcagtgcagccagctccttgaagaagcagtatatccagtgtctctat
gcctttgagtgcaagattgagcggggagaagaccctcccccagacatttttgcagctgct
gattccaagaagtcccagcccaagatccagcctccttctcctgcgggatcaggatctatg
caggggccacaaactcctcagtcaaccagcagttctatggcagaaggaggagacttgaag
cctccaactccagcatctacaccacatagtcagattccccccttaccaggcatgagcagg
agcaactcagttggaatccaggatgcctttcctgatggaagtgaccccacattccagaag
cggaattccatgactccaaaccctgggtaccagcccagtatgaatacctctgacatgatg
gggcgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaagccccagga
agtgatcccttcatgtcctcagggcagggccccaacggcgggatgggtgacccctacagc
cgtgctgctggccctgggctgggaaatgtggctatgggaccacgacagcactatccctat
ggaggtccttacgacagagtgaggacggagcctggaattgggcctgaaggaaatatgggc
actggggctccccagccaaatctcatgccttccaccccagactcggggatgtattctcct
agccgctatcccccgcagcagcaacagcagcagcaacgacatgattcctatggcaatcaa
ttctccacccaaggcaccccttccagcagccccttccccagccagcagaccacaatgtat
caacagcagcaacagaattataagaggccaatggatggcacatatggccctcctgccaag
cggcatgaaggggagatgtacagtgtgccatatagcactgggcaagggcagcctcaacag
caacagttgcctgcagctcagtcccagtctgccagccagcaacaagctgcccagccttcc
cctcaacaagatgtgtacaaccagtacagcaatgcctatcctgctgctgccaccgctgct
actgagcgccgaccagcaggcggcccccagaaccaatttccattccagtttggccgagac
cgggtctctgcacctcctggttccaatgcccagcagaacatgccaccacaaatgatgggc
ggccctatacaggcatcagccgaggttgctcagcaaggcaccatgtggcaggggcgtaat
gacatgacctacaattatgccaacagacagagcacaggctctgccccccagggtcctgcg
tatcatggtgtgaaccgaacagatgaaatgctccacacagatcagagggccaaccatgaa
ggcccatggccttcccatggcacacgccaacctccatatggtccttcagcccctgtaccc
cccatgacaagaccccctccatctaactaccagcccccaccgagcatgcagaatcacatt
cctcaggtatccagccccgctccccttgtccggccaatggagaaccgcacctctcctagc
aaatctccattcctgcactctggcatgaaaatgcagaaggcaggtccaccagtacctgcg
tcacacatagcacccacccctgtgcagccccctatgattcggcgggatatcaccttccca
cctggctctgtggaagctacccagcctgtgctgaagcagagaaggcggctcacaatgaaa
gacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctgggctcctggca
gagagcacgtgggcgttagacaccattaacatcctcctatatgatgacaacagcattatg
accttcaacctcagtcagctcccagggttgctagagctccttgtggaatatttccgtcga
tgcctgattgagatctttggcattttaaaggagtatgaggtgggggacccaggacagaga
acactattagatcctgggagattcagcaaggtgtctagtccagcccccacagaggaagaa
gatgaagaactcctagattctaaactggaggaggaggaagaagtggttgaaaatgatgag
gagatggccttcttaggcaaggataagccagcttcagagaatagtgaggagaagctagtc
agtaagtttgacaagcttccagtaaagattgtgcagaagaacgacccatttgtggtggac
tgctcagataagcttgggcgtgtgcaggagtttgacagtggcctgctgcactggcggatt
ggtggtggggataccactgagcatatccagacccattttgagagcaaggtagagctgctg
ccttcccggccttatgtgccctgcccaacgccccctcggaaacacctcacaacagtagag
ggtacacaagggacagcagagcaggagggccccccgcctgatgcccttccagaaaaaagg
atcacagccactatggatgacatgttgtccacccggtctagcacgttgactgatgaggga
acaaagagtgcagaggccaccaaggagagcagcaaatttccatttggcattagcccagca
cagagccaccggaacatcaagattttagaggatgagccccacagtaaggatgagacccca
ctgtgtacccttctggactggcaggattcccttgctaagcgctgtgtctgcgtctccaat
accatccggagcctgtcatttgtgccaggcaacgactttgagatgtccaaacacccaggg
ctgctgcttatcctaggcaagctgatcctactgcaccataagcatccagagcggaagcag
gcaccactaacttacgagaaggaggaggagcaggaccaaggggtgagctgtgacaaggtg
gagtggtggtgggactgcttggagatgctccgggaaaacacgctggtcacgctggccaac
atctcggggcagctggacctatccccgtaccctgaaagcatctgcctgcctgtgctggac
ggactcctacactgggcagtttgcccttcagctgaagcccaggaccctttctccacccta
ggccccaatgccgtcctttctccccagagattggtcttagaaaccctcagcaagctcagc
atccaggacaacaatgtggacctgatcctggccacgcccccatttagccgcctggagaag
ttgtatagtaccatggtgcgcttcctcagtgatcgaaagaacccagtatgccgggagatg
gctgtggtactgctggccaatctggcacagggggacagcctggcagcccgggccattgcg
gtgcagaagggcagcatcggcaacctcctaggcttcctagaggacagccttgctgccaca
cagttccagcagagccaggccagcctcctccatatgcagaacccaccctttgaaccaact
agtgtggacatgatgcggcgggctgcccgtgcactgcttgccctggcaaaggtggacgag
aaccactcagagttcactctgtatgagtcacggctgttggacatctcggtatcaccattg
atgaactcattggtttcacaagtcatttgtgatgtactgtttttgattggccagtcatga
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integrated database retrieval system
