KEGG   Chionomys nivalis (European snow vole): 130883498
Entry
130883498         CDS       T11437                                 
Symbol
Kdm4a
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
cnl  Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:cnl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cnl03036]
    130883498 (Kdm4a)
Enzymes [BR:cnl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     130883498 (Kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     130883498 (Kdm4a)
Chromosome and associated proteins [BR:cnl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130883498 (Kdm4a)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 Tudor_5 53-BP1_Tudor LBR_tudor DUF4537
Other DBs
NCBI-GeneID: 130883498
NCBI-ProteinID: XP_057639993
LinkDB
Position
11:32192718..32237808
AA seq 1063 aa
MASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRTSYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRRFQPERYKLWKAGKDSTIIDHTLPTPEAAEFLKDSGLP
PRTGDEECPEEDMEGVEQGEEGDVKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEELS
SGQYELTECQATLAPVRPTHSSVRQVEDGLPFPDYSDPTEVKFEELKNVKLEEEDEEDEP
ETAALDLSVNPASIGGRIVFSGSKKKSSSSLGSSSSQDSVSSDSETSESVSCQGQEKTGV
LTVHSYARGDGRTATGEPSVKKKRSAPRSISEQELAEVADEYILTLEENKKTKGRRQPLS
KLPRHHPLVLQECGSDDETSEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFNELM
AQQAPHCAVCMIFQTYHQVEFGSFTQTCGKASEAAAQTQRTKPLIPEMCFTTTGCSTDIS
LSTPYLEEDGTSMLVSCKKCSVRVHASCYGVPPAKASEEWMCSRCSANALEEDCCLCSLR
GGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRKRNA
GCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALLSITA
GQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGE
VVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVA
SDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
NT seq 3192 nt   +upstreamnt  +downstreamnt
atggcttccgaatcggaaactttgaaccccagcgctcggataatgaccttttaccccaca
atggaggagttccggaacttcagcagatacattgcttatattgaatctcaaggagctcat
cgggctgggctagccaaggtcgttcctcccaaggagtggaagccacgaacatcctatgac
gatattgatgacctcgtcatccctgcacctatccagcagctggtgactggtcagtctgga
ctcttcactcagtacaacatacagaagaaagccatgaccgttcgtgagttccgaaagatc
gccaatagcgataagtactgtaccccacgatatagtgaatttgaagaacttgagcgtaaa
tactggaaaaacctcacattcaatcctcccatctacggtgcagatgtgaatggtactctc
tatgaaaagcatgttgatgagtggaatatcggccggctgaagaccatcctggacctggtg
gaaaaggagagtggcattaccattgagggcgtgaacaccccatatctgtactttggcatg
tggaagacatcgttcgcctggcatacggaagacatggatttgtacagcatcaattacctg
cattttggagagcccaagtcttggtattctgttccacctgagcatggaaaacgcctggaa
cgtcttgccaaaggctttttcccgggaagcgctcagagctgtgaggcctttctgcggcac
aagatgaccctgatttccccgttaatgctgaagaagtacggcattcccttcgataaggtg
acccaagaagctggcgagtttatgatcactttcccttatggttaccatgctggcttcaac
catggcttcaactgtgccgagtctaccaattttgctacccgtcggtggattgagtatggc
aagcaagctgtgctgtgctcctgcagaaaggatatggtgaagatctccatggacgtgttt
gtgaggaggttccagcccgagcgctacaaactctggaaagctgggaaggacagcaccatt
attgaccatactctgcccactccagaagctgccgagtttctgaaggacagtggactgccc
ccaagaactggggatgaggagtgcccagaggaggacatggaaggggtcgagcagggagag
gagggagatgtgaagagaagcctggccaagcaccgaatagggacaaagcgacaccgagtc
tgtcttgaaataccacaggaggtgagccagagtgagctcttccccaaggaagagctgagt
tctggacaatatgagctgacggagtgccaagccaccctcgccccagtgagacccacccac
agctctgtgcggcaagttgaggatggtcttccttttccagattactctgaccccactgaa
gtcaaatttgaagagctgaagaatgtcaaactggaagaggaggatgaggaggacgagcct
gaaacagccgcgctggacctctctgtgaatcctgcttccataggaggacgcattgtcttc
tcgggttccaaaaagaaatcctcttccagcctgggctccagttcatctcaggattcagtt
tcttcagattctgaaaccagcgagtctgtctcttgccaaggccaagagaaaacaggagtt
ctcactgtgcacagctatgccagaggggatggccggaccgccacaggagagccgagtgtg
aagaagaagcgcagcgccccacgaagcatcagtgagcaggagctggcagaggttgcagat
gagtacatacttaccctggaggagaataagaagaccaagggtcgccgccagcccttaagc
aagctcccgcgccatcacccgctcgtgctgcaggagtgtggcagtgatgacgagacttct
gaacagcttacccctgaggaagaggctgaggagacagaggcttgggccaaacctctgagc
cagctgtggcagaaccgacctccgaactttgaggctgaaaaggagttcaatgagctcatg
gcccagcaggctccccattgtgctgtctgtatgatcttccagacataccaccaggtggag
tttggaagctttactcagacctgtgggaaagcgtcggaagcagctgctcagacccagagg
accaagccattgatcccagaaatgtgctttaccacgacgggctgcagcacagacatcagc
ctttctaccccttacctggaggaggatggcaccagcatgctagtgtcctgcaagaagtgc
agtgtccgcgtgcacgccagttgctatggggtgccccccgcaaaggcttctgaagaatgg
atgtgttctcggtgttcagccaatgctctggaggaagactgctgtttgtgctcattgcgt
ggcggggccctgcagagagccaacgatgacagatgggtccatgtttcatgtgctgtggca
attctagaagcaaggtttgtcaacatcgctgagagaagtccagtggatgtgagcaaaatc
cctctgccccgcttcaagctgaagtgcgtcttctgtaagaagcggaggaaaaggaacgcc
ggctgctgtgtgcagtgttcgcacggccgctgccccaccgccttccacgtgagctgcgcc
caggctgcgggggtgatgatgcagcccgatgactggccttttgtcgtcttcatcacctgc
ttccggcacaagatccccaatttggagcgtgctaagggggccttgctgagcatcacggcc
ggccagaaggtcatcagcaagcacaagaacgggcgcttctaccagtgcgaggtggtcaga
ctcaccaccgagaccttctatgaagtcaactttgatgatggctccttcagtgacaacctt
tatcccgaggacattgtgagtcaggactgtctccagctggggcctcctgctgaaggtgaa
gtggttcaagtgagatggacagatggtcaagtctatggggccaagtttgtggcctcccac
cccatccagatgtaccaggtggagtttgaggatggctcacagcttgtggttaagagagat
gacgtatacacactggatgaggagcttcccaagagagtcaagtctagactgtcggtagct
tcagacatgcgtttcaatgagattttcacagagaaggaagtaaagcaagaaaagaaaagg
caacgggtcatcaactcaaggtaccgggaggattacatcgagccagcactgtaccgggcc
atcatggagtag

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