Chionomys nivalis (European snow vole): 130883719
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Entry
130883719 CDS
T11437
Symbol
Prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
cnl
Chionomys nivalis (European snow vole)
Pathway
cnl00310
Lysine degradation
cnl01100
Metabolic pathways
cnl04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130883719 (Prdm16)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
130883719 (Prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnl03000
]
130883719 (Prdm16)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130883719 (Prdm16)
Enzymes [BR:
cnl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
130883719 (Prdm16)
Transcription factors [BR:
cnl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130883719 (Prdm16)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130883719 (Prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
SET
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
C2CH-3rd_BIRD-IDD
zf-H2C2_5
zf-BED
Zap1_zf1
DUF7128
C2CH-4th_BIRD-IDD
zf-C2H2_15
HSV_VP16_C
Motif
Other DBs
NCBI-GeneID:
130883719
NCBI-ProteinID:
XP_057640413
LinkDB
All DBs
Position
11:1709664..2024142
Genome browser
AA seq
1179 aa
AA seq
DB search
MRSKARARKLAKSDGDVVNNMYEPDPDLLTGQSAEEETEDSILSPIPMGPPSPFPTSEDF
TPKEGSPYEAPVYIPEDIPIPPDFELRESSIPGAGLGIWAKRKMEIGERLGPYVVVPRAA
LKEADFGWEQMLTDTEVSSQESCIKKQVSEDLGSEKFCVDANQAGVGSWLKYIRVACSCD
DQNLTMCQINEQIYYKVIKDIEPGEELLAHVKEGAYSLGVVAPSLDEDPTFRCEECDELF
QCKLDLRRHKKYVCSSAGTPLYEGLGEDLKPEGLSRGNDGQAHECKDCERMFPNKYSLEQ
HMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRS
QHVGARAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHAD
CRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYTPGGIFTPGLPLTPSPMMDKTKPSPTL
NHGGLGFSEYFPSRPHPGSLPFSAAPPAFPTLTPGFPGIFPPSLYPRPPLLPPTPLLKSP
LNHAQDAKLPSPLGNPALPLVSAVSNSSQGATVAAGPEEKFDGRLEDAYVEKVKARSPDM
SDGSDFEDINTTTGTDLDTTTGTGSDLDSDVDSDRDKGKDKAKSSESKPEFGGGSVPPGA
MNSVAEVPAFYSQHSFFPPPEEQLLTASGAAGDSIKAIASIAEKYFGPGFMSMQEKKLGS
LPYHSVFPFQFLPNFPHSLYPFTDRALAHNLLVKAEPKSPRDALKVGGPSAECPFDLTTK
PKEAKPALLTPKVSLVPSSGEEQPLDLSIGSRARASQNGGSREPRKNHVYGERKPGVGEG
LAKVCPAQLPQQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGVLKEKYLRPSPLLFHPQM
SAIETMTEKLESFAAMKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGK
IFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFG
QQTNLDRHLKKHEHEGAPVSQHSGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRN
FIANSEMNQASTRMDKRPEIQDLDSNPPCPGSASAKPEDVEEEEEEELEEEDDDSLAGKS
QEDTVSPTPEPQGAYEDEEDEEPPNSLTMGFDHTRRRMQ
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccaaggcgagggcgaggaagctagccaaaagtgacggtgacgttgtaaataat
atgtatgaaccagacccggacctgctgaccggccagagtgccgaggaggagactgaggac
agcatcttgtcgcccatccctatggggccgccatcccccttccccaccagcgaggacttc
actcccaaggagggctcgccctatgaggctcctgtctacattcctgaagacattccaatc
ccaccagacttcgagttgcgagagtcctccatcccaggagccggtctggggatctgggcc
aagcggaagatggaaattggggagaggcttggcccctatgtggtggtgccccgggccgca
ctgaaggaggccgacttcggatgggagcagatgctgacggatacagaggtgtcatcccag
gagagctgcatcaaaaagcaggtctctgaagacttgggcagcgagaagttctgcgtggat
gccaatcaggccggggttggcagctggctcaagtacatccgtgtagcgtgttcctgtgat
gaccaaaacctcaccatgtgtcagatcaacgaacagatttactataaagtcatcaaggac
atcgagcctggagaagagctgctggcacacgtgaaagaaggtgcctactccttgggtgtt
gtggcacccagcctggatgaggaccccactttccgttgcgaggagtgtgatgagctcttc
cagtgcaaactggacctgaggcgccacaagaagtatgtctgcagctctgcagggaccccg
ctctacgagggcctcggggaggacctcaagcccgagggcctcagccggggcaacgatggg
caagctcatgagtgcaaggactgcgagcggatgttccccaacaaatacagcttggagcaa
cacatgattgtccacacagaggagcgtgagtacaaatgcgaccagtgtccgaaggccttc
aactggaagtccaacctcatccgccaccagatgtctcacgacagtggcaagcgtttcgaa
tgtgaaaactgtgtcaaggtgttcacggatcccagcaacctccagcgtcacatccgctca
cagcacgttggtgcccgggcccacgcctgccccgactgcggcaagacctttgccacatcc
tccggcctcaaacagcacaaacatatccacagcacggtgaagccattcatatgtgaggtc
tgccacaagtcctacacgcaattctccaacctgtgccggcataagcggatgcacgcagac
tgccgaactcagatcaagtgcaaggactgtgggcaaatgttcagcaccacctcctccctc
aacaagcaccggcgcttctgtgagggcaagaaccattacacgccgggcggcatcttcacc
ccaggcctgcccttgacccccagccccatgatggacaagacaaaaccctcccccaccctc
aaccatggggggctaggcttcagtgagtacttcccctccagacctcatcctgggagccta
cccttctcagccgcccctccagccttccccacgctcactccgggattcccaggtatcttt
cctccatccttgtacccacgaccgcctctgctacctcccacgccactgctcaagagcccc
ctgaaccacgcgcaggacgccaagctccccagcccactgggaaacccagccctgcccctt
gtctctgctgtcagcaacagcagccagggtgccacggtggccgcggggccagaggagaaa
ttcgacggccgattggaagatgcgtacgtcgagaaggtcaaagccaggagccctgacatg
tcagacggcagcgactttgaggacatcaacaccacgacggggacagacctggacaccacc
acgggcacaggctcagacctggacagtgacgtggacagtgaccgagacaagggcaaggac
aaggccaagtcatctgaaagcaaacctgagtttgggggtggatcagtgccccctggggcc
atgaacagtgtggccgaggtgccggccttctactcccaacactccttcttcccgccaccc
gaggagcaactgctgacggcctcaggagccgccggcgactccatcaaggccattgcatcc
atcgctgagaagtacttcgggcctggcttcatgagcatgcaggagaagaaactaggctcg
ctgccctaccactctgtgttccccttccagtttctgcccaacttcccccactctctctac
cccttcacggaccgagccctcgcccataacttgctggtcaaggctgagccaaagtcaccc
cgggatgccctcaaggtgggcggccccagtgcagagtgccccttcgacctcaccaccaaa
ccaaaagaggccaagcctgccctgctcacacctaaggtctccctggtcccctcatctggt
gaggagcagccgctagacttgagcatcggcagcagggcccgggcgagccagaacggaggc
agccgtgaaccgcggaagaaccacgtctacggtgaacggaagccaggggttggcgagggg
ctggctaaggtctgcccagcacagctgccccagcagccatccctgcactatgccaagccc
tcgcccttcttcatggatcccatctacagcagggtagaaaagcggaaggtgacggaccct
gtgggagtcctgaaagagaagtacctgcggccgtccccactactgttccatccccagatg
tcagccatagaaaccatgacggagaagctggagagctttgcagccatgaaggccgactca
ggcagctccctgcagcccctgcctcatcaccccttcaacttccggtccccacccccgacg
ctctcggatcccatcctcaggaagggcaaggagagatacacgtgcaggtactgtggcaag
atcttccccagatctgcgaacctcacaagacatctgaggacacatactggggagcagcca
tacaggtgcaagtactgtgaccggtcgttcagcatctcctccaacctccagcggcatgtg
aggaacatccacaacaaagagaagccgttcaaatgccacctgtgcaaccgctgctttggg
cagcagaccaacctggaccggcatctgaagaaacacgaacatgaaggtgcaccagtgagc
cagcactctggggttctcaccaaccacctgggcaccagcgcctcctcccccacctctgag
tcggacaaccatgcacttttagatgagaaggaagattcctacttctccgagatccgaaac
ttcattgccaacagtgagatgaaccaggcctctactcggatggacaaacggcctgagatt
caagacctggacagcaaccccccgtgtccaggctcagccagtgcaaagccggaggacgta
gaggaggaggaagaggaggagctggaggaagaggatgatgacagcttagccgggaagtca
caggaggacacagtgtcccccacacctgagccccaaggagcctatgaggacgaggaggat
gaggaaccgcccaactccctaaccatgggcttcgaccatacccgaaggcgtatgcaatga
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integrated database retrieval system
