Chionomys nivalis (European snow vole): 130883857
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Entry
130883857 CDS
T11437
Symbol
Prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130883857 (Prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnl03041
]
130883857 (Prpf4)
Spliceosome [BR:
cnl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130883857 (Prpf4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_WDR36-Utp21_1st
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_EML
ASA1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_NOL10_N
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
130883857
NCBI-ProteinID:
XP_057640648
LinkDB
All DBs
Position
11:complement(82302681..82321338)
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AA seq
521 aa
AA seq
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MASSRASSTATKAKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
DSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctctcgagcctcctccacggcaaccaaagctaaagcacctgatgatttagtt
gctcctgttgtgaagaaaccacatatctattatggaagcttggaagagaaagagagggaa
cgcctggccaaaggagaatctgggattttggggaaagaaggactcaaggcaggcattgaa
gccgggaatattaatataacctctggggaagtgtttgaaattgaggagcacatcagtgag
cggcaggcagaagtcttggcagagtttgaaagaagaaagagagcgcggcaaatcaatgtc
tccacagatgactcagaggtcaaggcttgccttcgagccttgggagaacctatcacactt
tttggagagggccctgctgaacgaagagaaaggttaagaaatatcctctcagtggttgga
accgatgccttaaaaaagactaaaaaagatgatgagaaatctaagaaatcaaaagaagag
tatcaacaaacctggtaccatgaaggaccaaatagcctaaaggtggccagactgtggatt
gctaattattcactccccagagcaatgaaacgcttggaagaggctcgtctccataaggag
attcctgagacaaccagaacctcccagatgcaagagctgcacaaatccctccggtctttg
aataatttctgcagtcagattggagacgatcggccgatctcctactgccactttagtccc
gattctaaaatgctagccacagcttgttggagtgggctctgcaagctctggtctgtgcct
gactgcagcctccttcacactcttcgaggccataacacaaatgtaggagcaattgtattc
caccctaagtccactgtctcattggaccaaaaggatgtcaacttggcctcttgtgctgct
gatggttctgtgaagctttggagtctggacagcgatgaaccagtggcagatattgaaggc
catacggtgcgtgtggctcgggtaatgtggcatccgtcagggcgtttcctgggcacgacc
tgttatgaccgttcatggcgcttgtgggatttagaagctcaagaggagatcctgcatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggtcgagtttgggacctgcgcacaggacggtgcattatg
ttcctagaaggccaccttaaagaaatctatgggataaatttctcccccaatggctaccac
attgcaactggcagcggtgacaacacctgcaaagtgtgggaccttcggcagcggcgttgt
gtctacaccatccctgcccatcagaatttagtgaccggtgtcaagtttgagcctatccac
ggagacttcttgctcacgggtgcctatgataacacagccaagatctggacccacccaggc
tggtccccgttgaagactttggctggtcatgagggcaaagtaatgggcctagacatatct
tctgatgggcaactcatagccacttgctcgtatgacaggaccttcaaactctggatggca
gagtag
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integrated database retrieval system
