Chionomys nivalis (European snow vole): 130884628
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Entry
130884628 CDS
T11437
Symbol
Trim13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130884628 (Trim13)
04121 Ubiquitin system [BR:
cnl04121
]
130884628 (Trim13)
Enzymes [BR:
cnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130884628 (Trim13)
Membrane trafficking [BR:
cnl04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
130884628 (Trim13)
Ubiquitin system [BR:
cnl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130884628 (Trim13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
MG280
ATP-synt_E_2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130884628
NCBI-ProteinID:
XP_057641721
LinkDB
All DBs
Position
12:complement(51543834..51552550)
Genome browser
AA seq
407 aa
AA seq
DB search
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKE
TSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCVTDMQLICGICATC
GDHTKHVFSSIEDAYAQERNAFESLFQSFETWRRGDALSRLDTLETNKRKSLQLLTKDSD
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLSTILQEQRMAFNIAEAFK
DVSEPIIFLQQMQEFREKIKVIKETPLPPSNLPTSPLMKNFDTSQWENIKLVDVDKLSLP
QDTGVFVSKIPWRSYQLLMVVVLLGLLVFFGPTVFLEWSPFDELAAWKDYLSSVSSYLTK
SADFVQQSVFFWEQMTDGFFIFSERVRSFGLVALNTVAEFVCRYKLL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcttgaagaagatctcacgtgccccatttgctgcagtttgtttgatgatccc
cgagttttgccctgctcacacaacttctgcaagaaatgtttagaagggcttctagagggg
aacgtgcggaattcattgtggagaccatctccgttcaagtgtcctacctgccggaaggag
acttcagcaactggggtcaatagtctgcaggttaattactccctcaagggtattgtggag
aaatacaacaaaatcaagatttctccaaaaatgccagtgtgcaaaggacacttgggacag
cctctcaacattttctgtgtaactgatatgcagctcatttgtggcatctgtgctacctgt
ggtgaccacactaagcatgtcttctcttctattgaagatgcctatgctcaagaaaggaac
gcctttgagtccctctttcagagttttgagacttggcgccggggagatgctctttcccgc
ttggatactttggaaacaaacaaaaggaaatccttacagttactcactaaagattctgat
aaagtaaaggagttttttgagaagttacaacacacattggatcaaaagaagaatgaaatc
ctgtctgactttgagactatgaaacttgcagttatgcaagcctatgatccagagatcaac
aaactcagcactattttgcaggagcagcggatggcctttaacatcgccgaggctttcaag
gatgtgtcagaacctattatatttttgcaacagatgcaggagttcagggagaaaatcaaa
gtaatcaaggaaacacctttgccaccctccaatttgcccacaagccctttaatgaagaac
tttgataccagccagtgggagaacattaaactagtcgacgtggataagctttctttgcct
caagacaccggcgtgttcgttagcaagattccctggcgctcttaccagctgttgatggtg
gtggttctgctgggtctcctcgtattctttggtccgaccgtattcctggagtggtctcca
tttgatgagttggcagcttggaaagactacctttcaagtgtcagctcttacctgactaag
tcagctgactttgtacaacagtctgtttttttctgggaacagatgacggatgggtttttc
atttttagtgaaagagtcagaagttttggtttggtggcactgaacactgtggcagaattt
gtgtgcagatacaaactgctgtaa
DBGET
integrated database retrieval system
