Chionomys nivalis (European snow vole): 130884839
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Entry
130884839 CDS
T11437
Symbol
Lgi3
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130884839 (Lgi3)
Membrane trafficking [BR:
cnl04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
130884839 (Lgi3)
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Ortholog
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRR_9
LRRCT
stn_TNFRSF12A
LRR_1
LRR_14
Motif
Other DBs
NCBI-GeneID:
130884839
NCBI-ProteinID:
XP_057642055
LinkDB
All DBs
Position
12:complement(43168369..43177289)
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AA seq
548 aa
AA seq
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MAGLRARLGPGRRLLVLSTLSFCLMLQASAKKPPKTPPCPPSCSCTRDTAFCVDSKAVPK
NLPSEVISLTLVNAAFSEIQDGAFSHLPLLQFLLLNSNKFTLIGDNAFIGLSHLQYLFIE
NNDIWALSKFTFRGLKSLTHLSLANNNLQTLPRDIFRPLDILSDLDLRGNALNCDCKVKW
LVEWLAHTNTTVAPIYCASPPRFQEHKVQDLPLREFDCITTDFVLFQTLSFPAVSAEPFL
YSSDLYLALAQPGASACTILKWDYVERQLRDYDRIPAPSAVHCKPMVVDSQLYVIVAQLF
GGSYIYHWDPNTTRFTKLQDIDPQRVRKPNDLEAFRIDGDWYFAVADSSKAGATSLYRWH
QNGFYSHQALHAWHRDTDLEFVDGEGKPRLIVSSSSQAPVIYQWSRSQKQFVAQGEVTQV
PDAQAVKHFRAGRDSYLCLSRYIGDSKILRWEGTRFSEVQALPSRGSLALQPFLVGGHRY
LALGSDFSFTQIYQWDEGRQKFVRFQELAVQAPRAFCYMPAGDAQLLLAPSFKGQTLVYR
HVVVDLSA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctacgagccaggctgggccctgggcgcaggctactggtgctgtctacgctg
agtttttgcctaatgctgcaagccagtgccaagaagcctcctaagacgcccccctgccca
cccagctgctcctgcaccagggacaccgccttctgcgtggactctaaggcagtgcccaag
aacctgccttcagaggtcatctccctgaccctggtgaatgctgcgttctcagagatccaa
gacggagccttctcccacctgccactgttacagttcttgttgctcaactccaacaagttc
acgctcattggagacaatgccttcataggactgtcgcacctgcagtacctcttcatcgag
aacaatgacatctgggcactttccaagtttacctttcgaggactcaagtccttgacacac
ctctcactggccaacaataacctgcagacactgcccagagacatcttccgtcccctggac
atcctgagtgacttagacctccggggcaatgcccttaactgtgactgcaaggtgaaatgg
ctggtggagtggctggcacacaccaacaccacggtggcccccatctactgtgccagcccg
ccccgcttccaggagcacaaggtgcaagacttgccccttcgggagttcgactgcatcacc
actgatttcgtcctcttccagactctgtccttccccgcagtgtcagcggaacccttcctt
tactccagcgacctctatctggcactggcccagccgggtgccagcgcctgcaccatcctg
aagtgggactacgtggaacggcagctccgagactatgatagaattccagctccctcagcg
gtgcactgcaagccgatggtggtggacagccagctctatgtcatcgtggcccagctgttt
ggtggctcgtacatttaccactgggaccccaacaccacacgtttcaccaagctgcaggac
atcgacccccagcgcgtgcgcaagcccaatgacctggaagccttccgcattgatggtgac
tggtactttgccgtggctgacagctccaaggcaggcgccactagcctctaccgctggcac
cagaatggcttctattcccaccaggccctgcacgcctggcaccgcgacactgacctggag
tttgttgacggtgagggcaagccgcggctgattgtgtctagcagttctcaggcccccgtc
atctatcagtggagtcgttctcagaagcagtttgtggcgcagggagaggtgactcaggtg
cctgacgcccaggccgtgaaacactttcgtgctggccgcgacagctacctgtgtcttagt
cgctacatcggtgactccaaaatcctgcgctgggagggtacccgtttctctgaggtgcag
gccctcccctcccggggttcgctggcccttcagcccttcctggtaggtggtcaccgctac
ctggcactgggcagtgacttctccttcacgcagatttaccagtgggacgaggggcgacag
aagtttgtacggttccaggagctggccgtacaggcccctcgggccttctgctatatgcct
gctggagatgcccagctgctcctggcccccagtttcaagggacaaacactggtgtaccga
catgtcgtggtggatctcagtgcctag
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