Chionomys nivalis (European snow vole): 130885613
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Entry
130885613 CDS
T11437
Symbol
Carmil1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130885613 (Carmil1)
Membrane trafficking [BR:
cnl04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
130885613 (Carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Spectrin_5
Cep57_CLD
IL34
Muted
Motif
Other DBs
NCBI-GeneID:
130885613
NCBI-ProteinID:
XP_057643218
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All DBs
Position
13:complement(43097861..43361922)
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AA seq
1414 aa
AA seq
DB search
MTDESSDVPRELMESIKDVIGRKIKISVKKKVKLEVKGDRVENKVLVLTSCRAFLLSARI
PTKLELTFSYLEIHGVICHKPTQMVVETEKCSMSMKMESPEDVSDVLAHIGTCLRKLFPG
LSPLRILKKVSMEPSERLASLQALWDSQTLAEPGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLEHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHMINLAGNPLEDRGVSSLSVPF
AKLPKGLKHLNLSRTSLSPKGVNSLCQSLSANPLTASTLTHLDLSGNALRGDDLSHLYNF
LAQPNTIVHLDLSNTECSLELVCSALLRGCLQCLSVLNLSRSVFSHRKGKEVPLSFKQFF
SSSLALMQINLSGTKLSPEPLKALLLGLACNHSLKGVSLDLSNCELRSGGAQVLEGCIAE
IHNIISLDISDNGLESDLSTLIVWLSKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMFDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRVCVKVQDHLNSLRSCGGDAIQEDLKTA
EQLMRDAKNSKTLLPNLYHVGGASWTGASGLSSSPIQETLESMAGEVTRVVDEQLKGLLE
SMVDAAENLCPSVMKKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRIVDEILEALSSSHRKLADHYSRRGKSLPQRESLEVELAEEKPVKRATLMVED
LNEVERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPS
IRQEKRSSGLISELPSEEGRRLEHFTKLRPKRNKKQQPTQAAICTVNIVPHDGEQNGLMG
RVDEGVDEFFTKKVTKMDSKRSSTRCSDTHELSEGDEKKKRDSRRSGFLNLIKSRSRSER
PPTVLMPEELSSPKGAVRSPPVDTARKDIKAAEHNGAAERTEETKTPEPLEEGPAEEAGR
TERSDSRGSPQAGRRYVQMMDSGMLAEIKAKQERRAASAQKKLINDVISQESSSPVLSKP
EQSDGGGTALPEARFGLGTPEKNAKAEPKVDVGCRSRSSSSIPTSPKPLLQSPKPSPGAR
PSIPQKPRTVSRPEDPDSPSGPSSPKVALLPPILKKVPSDKERDGQSSPQPSPRTFSQEV
VQRGDYFKRHSDHDSGKPSSRGKRSSKPYSTIAEEEVNAPGYRKSQPTNVSRRSWGPQAQ
EYQEQKQRSSGKDGHQGSKSSDSGEEAEKEFIFV
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagagctccgacgtcccccgggagttgatggaaagcataaaggatgtgatt
ggcaggaagatcaaaatctcagtgaagaagaaggtgaagttggaagtgaagggagacaga
gtggagaacaaagtgctggtgctcacgtcatgccgagccttcctcctgtcagcgcgcatc
cccaccaagctcgagttaaccttcagctatctggagattcatggagtcatctgccacaag
ccaactcaaatggttgtggaaactgaaaagtgtagcatgtccatgaagatggagtcaccg
gaggacgtgagtgatgtgctggctcacataggcacctgcttgcggaagctgttccctggc
ctctccccactgagaatcctgaagaaagtctccatggagccatctgagcgcctggccagt
ctccaggccctgtgggacagccagaccttggctgagccaggtccctgtggtgggttttca
cagatgtatgcctgtgtgtgcgactggctgggattttcctacagggaggaagtgcagtgg
gatgtggatacaatttatctgacacaagacaccagggaattgaatttgcaagacttcagt
caccttgagcacagagacctgatccccatcattgctgccctggaatataatcagtggttc
accaaactgtcctccaaggatcttaagctgtccactgatgtctgtgaacagattttgagg
gtggtgagtaggtccaatcgactggaagaattggtgttggaaaatgctggactcagaaca
gattttgcacagaaattggccagtgctctagcacataatcctaactcaggccttcacatg
atcaaccttgccggaaacccgctggaggaccgaggtgtgtcctccttaagtgttccgttt
gccaaactcccaaagggactgaagcatttaaacctctcgagaacctcattgtcacctaaa
ggggtgaacagcctttgtcagtccctcagtgccaaccctctgactgcctctaccctcacc
cacctggacctctcagggaatgctctccgtggagatgacctctcgcatttgtacaatttt
ttggcccagcccaacaccatcgttcacctggacttatctaacacagaatgttctctggaa
ttggtgtgtagcgctcttctccgggggtgccttcagtgtctatccgtgctcaatctctcc
agatccgtcttctctcacaggaaaggaaaggaagtccccttatctttcaagcagtttttc
agcagttctctggctttgatgcaaatcaatctttcaggcacgaaactgtctccggagccc
ttgaaggcactgctcttgggcctggcctgcaatcatagcttgaagggggtctctctggac
ctcagcaactgtgagctgaggtctggaggagctcaagtgctagaaggctgcatcgccgaa
atccacaacatcatcagcttagacatctctgacaacgggctagaatccgacctctctacc
ctgatagtgtggctcagcaaaaacagatccatacagcacctggcgctagggaaaaatttt
aataatatgaaatccaaaaacctgacgcctgtgttggacaacttagtgcagatgatccag
gatgaagaatctcctctgcagtccttgtccctggctgactcaaaactcaagactgaggtc
accatcatcatcaatgccctgggcagcaatacctccttgaccaaagtggacatcagtggg
aatggcatgggggatatgggagccaagatgctcgccaaggctctacagatcaacaccaag
ctcaggacagtcatctgggacaaaaacaacatcaccgcacaaggctttcaagatatagcc
gttgctatggaaaagaactacacactgagattcatgccaattcctatgttcgatgcttcc
caagctcttaaaacaaaccccgagaagacagaagaagctctacaaaagatagaaaattat
ctgctccggaatcacgagactagaaaataccttcaggagcaggcctaccgcctccagcag
ggaattgtcaccagcaccacccagcagatgattgaccgggtatgtgtgaaggttcaggat
cacctcaactccttgcggtcctgtgggggcgatgctatccaggaggatttaaagacagca
gagcagctcatgcgtgatgctaagaactctaaaacgttgttaccgaatttataccacgtg
ggtggagcttcctggacaggggccagtggcctgtcatccagccccattcaggagaccctg
gaatcaatggccggagaagtcacaagagttgttgatgaacaactgaagggtttgcttgaa
tctatggtggatgccgctgagaacctctgccccagtgtgatgaaaaaagcccacatccga
caagacctgatccacgccagcaccgaaaagatttccatcccacgcacctttgttaaaaat
gtcctcttggaacagtctggaattgacattcttaacaaaattagtgaggtgaagctgaca
gtggcctcattcttgtctgaccgcatcgtggatgaaatcctggaggcgctctccagcagc
catcggaagctggcggaccattacagcaggcgaggcaagagccttccccaacgggagtcc
ctagaggtggagctggccgaggagaagccggtgaagcgtgccacacttatggtggaggat
ctcaacgaggtggagaggttggaagacctagacacctgtatgatgactcccaagtccaag
aggaagagcatccacagccgaatgctgcggcccgtctccagggcatttgaaatggaattt
gatcttgataaagccctggaagaggtgccgatccacattgaagacccgcctttcccatcc
atccggcaggagaagcgcagctcaggcttgatttccgagctgccctcagaggaaggcagg
agactggaacactttacgaagttacggcccaagcggaacaagaagcagcagcctacacag
gcagcgatctgtaccgtcaacatcgtcccccatgatggagaacagaatggcctcatgggc
agagtggatgaaggtgtagacgaatttttcaccaagaaggtgactaaaatggacagcaag
aggtcatccacacgctgctcagatacccatgaactgagcgaaggagatgagaaaaaaaaa
cgggattctcggagaagtggctttctcaacctaatcaaatcgcggtccagatctgagcgg
ccacccacggtcctgatgccggaagagctctcctccccaaagggggcagtccgaagtcca
ccggtggacacggctaggaaggacataaaggcagctgagcacaatggtgctgcggagcgc
actgaggagacgaagacaccggaacccctggaggagggcccggcagaagaggcaggcagg
accgagcgcagcgacagcaggggtagcccacaggctggccggcgctatgtgcagatgatg
gacagcgggatgctggctgagataaaggccaagcaggagcggagagctgcgagcgcacag
aagaagcttatcaatgatgtcatctcccaggagtcctccagcccggtcttgagcaagcca
gagcagtcggatggaggtgggacagctcttccagaggcccgctttggtttgggaacaccg
gaaaagaatgccaaagcagaacccaaagtggatgtgggctgcaggtctcggagctcctcc
agcattcccaccagtccgaagcccctcctgcagtcccccaagcccagccctggagcccgg
ccttccatccctcagaagccaagaactgtctcccgacctgaagatccagactctccctct
ggtcctagttcccctaaagttgctcttcttccacccatcctcaaaaaagtcccctcagac
aaggagcgtgatggccagagcagcccccagcccagtcccaggaccttctcccaggaagta
gtgcaaagaggagattatttcaaaagacattcagatcatgacagtggcaagccttccagt
agagggaaaagatcttcaaaaccctactccaccattgcggaagaggaagtgaatgcacct
gggtacaggaagtcacagccaacaaatgtctcaaggagaagctggggtccgcaggcccag
gagtatcaagaacaaaagcagcggtcctccggcaaagatggtcaccaagggagcaaatcc
agtgactctggagaagaggcagaaaaagagtttatttttgtgtaa
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