Chionomys nivalis (European snow vole): 130886821
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Entry
130886821 CDS
T11437
Symbol
Dsc1
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130886821 (Dsc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnl04515
]
130886821 (Dsc1)
Cell adhesion molecules [BR:
cnl04515
]
Cadherins
Major cadherins
130886821 (Dsc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_pro
CADH_Y-type_LIR
RET_CLD1
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
130886821
NCBI-ProteinID:
XP_057644985
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All DBs
Position
14:61100192..61129868
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AA seq
895 aa
AA seq
DB search
MAVASAAPGSTFSKQLLFSLLVLVLFCNACQKISLQVPAHLKAETLVGKVNLDECLKSAS
LILSSDPAFRVLDDGTIFTTHDLLLSSEQRRFSIFLSDSQSQEQKEIEIELSAKEKKVFR
KRHTEDPVHKRSKRRWAPIPCSLMENSLGPFPQHVQQIQSDAAQNYTIFYSISGPGVDKE
PFNLFYIEKDTGDIYCTRSIDREQYDQFLVYGYATTADGYAPDYPLPLLFKVEDDNDNAP
YFETKLTVFSVPENCRTGTSVGQVTAIDNDEPGTLHTRLRFKILQQIPDQPRHFSIHPDT
GVITTTSPLLDREKCDTYKLVMEVRDMGGQPFGLFNTGTITISLEDENDNSPYFTQTSYT
TEVEENRIDVEILRMTVQDQDLPGTPHSKAVYSILQGNENGNFRITTDPNTNEGVLCVIK
PLNYESSRQVILQIGVLNEAQFSKAANGQTPTMCTTTVTVKIKDSDEGPECQPPVKVIQS
KDGLPAGQELLGYKAMDPETSSSDGIRYQKVGDEDNWFEINESTGNLKTLKILDRESKFV
KNNQYNISVVAMDTLGRSCTGTLVVLLEDFNDHPPQVDKDLTICQQEKDYAVLEPVDLDG
PDNGPPFQFFLDNSASKLWTLEPQDGKRAILRQRHNLNYNYYSVPIQIQDRHGFSAKHML
SVRVCDCSVPSECRMSAKEERDIKPKVILGKWAILSMVLGSALLLCILFTCFCVTTTKRT
VKKCFPDDVAQQNLIVSNTEGPGEEVTEANIRLPAQTFCDTSTSVGTLGGQGMKTQQNFE
MVKGGYTLESNKGGGHHTLESNKGGVLGAADTGRYAYTDWQSFTQPRLGEKVYLCGQDEE
HKHCEDYVRSYHYEGKGSMAGSVGCCSDRQEEEGLEFLDHLEPKFRTLAKTCVKK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctccgctgccccagggagcaccttctctaagcagctccttttctctctc
ctggttctggtgttattttgcaatgcctgtcaaaaaatttctcttcaagttcccgctcat
cttaaggctgaaacacttgtaggcaaagtgaatctggacgagtgcctcaaatcagccagc
ctgatcctgtccagcgacccagccttcagagtgctagacgacggcacaatctttacaaca
catgacctgctcttgtcctctgaacagaggaggttctccatcttcctctcagacagtcag
agtcaggagcaaaaggaaatagaaatcgaattgtcagcaaaagaaaaaaaggtatttagg
aagagacataccgaagacccagtgcacaagcgcagtaagaggagatgggctccaattccg
tgttcgctgatggagaactcattaggcccattcccacaacacgttcaacagattcaatct
gacgctgcccagaattataccatcttttactccatcagtggaccaggagtggacaaagag
cctttcaatttgttctacatagagaaagacactggggacatctattgtactaggagcatt
gaccgtgagcagtatgatcaatttttggtgtatggatacgcaaccactgctgacggctat
gctccggactatcctctccccttgctgttcaaggttgaagatgacaatgacaatgcccca
tattttgaaaccaaactgacagtttttagtgtgcctgaaaattgccgaactggaacttca
gtaggccaagtgactgccatagacaacgatgagccaggaaccctacacactcgtttgaga
ttcaaaatcctacaacaaatcccagatcagccaaggcatttctccatacaccctgacaca
ggtgtgatcactaccacctcccctttactggacagagagaaatgtgatacttacaagcta
gtgatggaagttcgagatatggggggccagcccttcggtctattcaatacaggaacaata
acaatctcactggaggatgagaatgacaattcaccgtatttcacccaaacttcttatact
acagaagtagaagaaaacagaattgatgttgagatcctaaggatgacagtccaagaccaa
gatttgcccggcacccctcactccaaagcagtgtactcaattctccaagggaatgagaac
gggaacttcagaatcacaacagacccgaacacaaatgaaggagtcctgtgtgttatcaag
ccactgaactatgaatccagtcgccaagtcattctgcaaatcggtgtcctcaatgaagcc
cagttctctaaagctgccaacggacagacccccacaatgtgcaccacgactgtgactgtg
aaaattaaagacagtgatgagggccccgagtgccagccaccagtcaaagtcattcagagc
aaagacgggctgccagccggccaagagctcctcggctacaaagccatggaccccgaaaca
agcagctctgacggcataaggtatcagaaggtaggagatgaagataactggtttgaaatt
aatgaaagcaccggaaacttgaaaaccctaaaaatattagacagagagtcaaaatttgtg
aaaaacaaccagtacaatatttcagttgtggcgatggatacacttggccggtcctgcacg
ggaacactggtagttcttctggaagattttaatgatcacccaccgcaggttgacaaagac
ctcaccatttgtcagcaggagaaggattatgctgttctggagcctgttgacctagatggg
cctgataatggtccaccttttcagtttttcttggataattctgccagtaaactttggact
ctagaaccacaggatggtaaacgtgccattcttcgccaacgacacaatctcaattataac
tattattctgtgccaatccaaatacaagatagacatggtttctctgcaaaacatatgcta
tcagtgagagtgtgtgactgttcagttccctccgaatgtaggatgagtgctaaggaggaa
agggacattaaaccaaaagtaatccttgggaaatgggccattctctccatggtcctgggc
tccgcactgctactgtgtattctgtttacatgtttctgtgtgactactacgaagagaaca
gtcaaaaaatgcttccccgatgatgtggcccagcaaaatttaattgtatcaaatactgaa
ggaccgggagaggaagtgacggaggcaaatattagactccccgcacagacattctgtgat
acaagcacatctgttgggactcttggtggccaaggaatgaaaacacaacaaaactttgag
atggtcaaaggaggctacactttggagtccaacaaaggaggtggccaccacaccttggag
tccaacaagggaggtgtgctgggagcagcagacactggccgatatgcatacacagactgg
caaagtttcactcaaccccggcttggtgaaaaggtgtatctgtgtggacaagatgaggaa
cacaagcattgtgaagattacgtccgttcgtatcactatgaaggcaaaggctccatggct
ggctctgtgggctgttgcagtgatcggcaggaggaagaagggctggaatttttagatcac
ttggaaccgaaatttaggacattagcaaagacatgtgtgaagaaataa
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