Chionomys nivalis (European snow vole): 130887035
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Entry
130887035 CDS
T11437
Symbol
Sncaip
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl05012
Parkinson disease
cnl05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
130887035 (Sncaip)
05022 Pathways of neurodegeneration - multiple diseases
130887035 (Sncaip)
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GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
130887035
NCBI-ProteinID:
XP_057645284
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Position
14:complement(31299688..31447738)
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AA seq
965 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSTSWNCGVSTLITNP
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNENDDQKNNTVEYQKGGETDQDPQPEELS
TEDGVRGLPGKGSENSQALGELEHYDLDMDEILDVPYIKSSQQLAPFTKVSSEKRILGLC
TTINGLSGKACPIGSTENSTPNMTPFCVLSPVKSPHLRKASTVLRDQHKLCTEDSESLPA
LGKCAPAYESENHSKDFLNKAFSDPHSRKIEKAGPDCKLRAFHLQSSAAGAKPEEQVNGM
NWTNAQGAEERSENLKKVRSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHVAASKG
HAECLQHLTSLMGEDCLNERNAEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFP
SLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYGA
NVTMQNHAGEKPSHSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQS
QLQQLLEAQKSEGKSLPSSPSSPSSPPSRKSQWRILDADDEATGKSKTGAQEGIQVLGSL
SASSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNLKKIPLEKRE
LKLARLRQLMQRSLSESDTDSNNSEDPKNTPVRKADRPRPQPIVESVETMDSAENLHLMI
KKHSLPSGRRFPFSTKASKSLDGHSPSPTSESSEPDLDSHCPGLGLTPPTQPSADPTQSS
PDSSTVQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKDRDRGR
APQRTSESGEQIKRPFGTFRSIMETLSGNQNNNNNYQPATQLKTCTLPLTSLGRKTADAK
GNPVSPASKGRNKPEVYSSCIHLPSNVLVEERLRGYERHNDIKRNMKKTYGRKHDAESES
KELFL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaattgactttagtgatgacatttcttac
tcagtcacatctctcaagaccatcccagaactgtgcagaagatgtgattcccaaaatgag
gacagatcagtttcaagcactagctggaattgtggtgtctcaactctcattacaaaccca
caaaagcccactggaatcgctgatgtatacagtaagttccgcccagtgaagcgcgtgtct
ccgctgaaacatcagccagagacgctggaaaacaacgaaaatgatgaccaaaagaataat
acagtagagtaccagaaaggtggggagactgaccaggacccccagcctgaggaactcagc
actgaagatggagttagggggttgccaggtaagggctccgagaacagccaggcactgggc
gagctggagcattacgaccttgacatggatgagattctggatgtgccttacattaaatcc
agtcaacagctggcccccttcactaaggtgtcttcagagaaaaggattttgggcttgtgc
acaaccatcaatggcctttctggtaaagcctgtcctattggaagcactgagaactccaca
cccaacatgactccattttgtgttctttctcctgtgaaaagtcctcacttgaggaaagca
tcgactgtcctccgggaccagcacaagctctgcacagaagactctgagagcttacctgct
ctgggtaaatgcgcccctgcgtatgagtccgagaaccacagtaaagacttcctgaacaag
gcttttagtgatcctcatagccgaaaaattgagaaggcggggccagactgcaagctcagg
gccttccacctgcagtcctcggcagcaggggccaaaccggaagagcaggtcaatggcatg
aactggaccaacgcccaaggcgcagaagaaaggagtgagaacctgaagaaagtaagaagc
atactgaacatcgtgaaagaaggacagatatcgctcttgccacacctagctgcagacaat
ctggacaaaattcacgacgagaacggaaacaatctgttacacgttgctgcgtcgaagggg
catgcagaatgtctgcagcacctcacatctctgatgggcgaagactgcctcaatgaacga
aacgcagagcagctgactccagcgggtctggccatcaagaatggccagttggagtgtgtg
cgctggatggtgagcgagacagaagccattgcagaattgagttgctccaaggacttccca
agccttattcattatgcaggttgctatgggcaggagaagattctcctgtggcttcttcag
ttcatgcaagaacaaggcatctcgctggacgaagtggaccaggaaggcaacagtgctgtt
cacgtcgcctcccagcatggctaccttggatgcatacagaccctggtggaatatggagca
aatgtcactatgcagaaccacgctggggaaaagccctcccacagtgctgagcggcatggg
cacacgctgtgctcccggtacctagtggtagtagagacctgcatgtcactggcctcacaa
gtggtaaagttgaccaagcagctaaaggaacagacagtggagcgtgtcacactgcagagc
caactccaacaacttctagaagcccaaaaatcagagggcaaatcactcccttcttcaccc
agttcaccctcctcaccaccttctagaaagtcccagtggagaatcctagatgcagatgat
gaggctacaggcaagagcaaaacaggagcccaggagggaatacaagttcttggaagctta
tcagcatccagcagggctaggaccaaaggaaaagatgaagactctgataaaatcctacgt
cagttattgggaaaagaaatctcagagaatgtctgcacccaggaaaagctgtcattggaa
ttccaggatgctcaggcatcctccaggaatttgaaaaaaattcccctggagaagagagaa
ttgaagctagccagactgaggcagctgatgcagaggtcattgagtgagtctgatacagac
tcaaacaactctgaagaccccaaaaatactcctgtgagaaaagcagacaggcccaggcca
cagcccattgtggaaagtgtggagactatggacagcgcagaaaacttacacctgatgata
aagaaacactctctgccatcaggacgcaggtttcctttcagtacaaaggcctccaaatcc
ctggatgggcacagcccatctcccacttcagagagcagtgaaccagacttggactcccat
tgtccaggcttggggctgactcctcccacccagccttctgcagaccctactcagtccagt
cccgacagttccactgtccagaaagttgccacgagccccaagagtgccctcaagtctcca
tcatccaaacgccggacatcccaaaactcaaaactcagagtcacctttgaggaacctgtc
gtgcagatggagcaaactagccttgaactaaacggagaaaaggacagagataggggcagg
gccccccagaggactagtgaatcaggggaacaaataaaaagaccttttggaactttccga
tccatcatggagactttaagtggtaatcaaaacaacaataacaactaccagccagccacc
cagctgaagacctgcacactgcccttaacatcacttggaaggaagacggcagatgccaag
ggaaaccctgtgagccctgctagcaaaggaaggaataagcccgaggtgtacagcagctgt
atccaccttccctctaacgtgctggttgaagaacgtctgcgtggctatgaacggcataat
gacatcaagagaaacatgaagaaaacctacggcagaaagcatgatgctgagtcagaatca
aaggaactcttcttatag
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