Chionomys nivalis (European snow vole): 130887941
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Entry
130887941 CDS
T11437
Symbol
Sntg1
Name
(RefSeq) gamma-1-syntrophin isoform X1
KO
K24065
gamma-syntrophin
Organism
cnl Chionomys nivalis (European snow vole)
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnl04990
]
130887941 (Sntg1)
Domain-containing proteins not elsewhere classified [BR:
cnl04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
130887941 (Sntg1)
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Motif
Pfam:
PDZ
Syntrophin_4th
PDZ_6
PH
CBM_17_28
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130887941
NCBI-ProteinID:
XP_057646657
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Position
16:complement(13447758..13805335)
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AA seq
517 aa
AA seq
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MDFRTTCEESKTGVCLLQDGNQEPFKVRLHLARDLLMLQEQDVLCVSGEPFYSGERTVTI
RRQTVGGFGLSIKGGAEHDIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEE
VVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHP
NNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHARFSQYLPGTDLSRQNAFQVVAVDGVC
SGIIQCLSTEDCMDWLQAIAANISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQESLQD
RVYTPVFLALRGSCLYRFPSPPVTTWDWTRAEKTFSICEIMCKVLKDSDLLDRRKHCFTM
QSECGEDFYFSVELESDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGF
ICYDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNSETKQIEAKELEFSNLFAVLHCIH
SFFAAKVACLDPLFLGHQAAASASATSASTSKAKHVA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagaactacctgtgaggagtcgaagacaggggtttgcttgctacaagatggt
aatcaggaaccttttaaagtccggctgcatcttgccagagatctgctgatgctacaggag
caagacgttctgtgtgtgtctggtgagcctttctattctggtgaaagaacggtgacaatc
agaaggcagacagtaggaggatttggattaagcataaagggaggtgcagaacatgacatt
ccagttgtcatttctaaaatctccaaggagcaaagagcggagctttcaggactgcttttc
atcggagatgcaattctacagataaatggaatcaatgtgaggaaatgcaggcatgaagaa
gtggttcaggtgctccggaacgctggggaggaagtgacgctgacggtgtcatttttaaaa
agggcgcctgctttcctcaagctccccctgaatgaagactgcgcatgtgctccaagtgac
caaagcagtggtacctcctctcctctttgtgacagtggcttgcatctcaactaccatcca
aacaatacagatacactttcctgctcttcgtggcccacatctccaggcttgcggtgggag
aagcggtggtgtgacctcaggctcattcctctactgcatgcccgcttctcccagtacctg
ccggggactgacctgagtcggcagaatgctttccaagttgttgctgtggatggagtctgc
agtggaattattcagtgcctgtctactgaagactgcatggattggctccaagcaatagca
gctaatatttcaaacctcacaaagcataatataaaaaaaatcaacagaaatttccctgta
aaccagcagattgtttacatgggttggtgcgaagcacgggagcaggaatcactccaggac
cgtgtgtacacacctgtctttctcgccctgaggggctcctgtctttacaggttcccgtca
cctccagtgaccacatgggattggacacgagcagagaaaactttctccatatgtgagatc
atgtgcaaggttctcaaggacagtgacctgctggatcggcggaaacattgctttactatg
cagtctgagtgtggggaggacttctacttctcagtggagttagagagtgaccttgcccag
tgggaacgagccttccaaacagccaccttcttagaagtagaacggatacagtgcaagaca
tatgcttgtgtgctggagagtcacctaatgggtctcacgattgacttcagcacgggtttc
atctgctatgacgcggcaacaaaggccatactttggaggtataaattctctcagcttaaa
ggctcatcggatgacggcaaaagcaaaataaaatttttgtttcagaattcagaaactaaa
caaattgaagcaaaggagttggaattttcaaatttatttgctgttcttcactgtattcac
tcattttttgctgccaaagtagcttgtttggaccctctgtttttaggtcatcaggctgct
gcttctgcttctgctacctctgcttctacaagcaaagcaaagcacgtggcttga
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