Chionomys nivalis (European snow vole): 130888598
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Entry
130888598 CDS
T11437
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03082
ATP-dependent chromatin remodeling
cnl05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130888598 (Arid2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
130888598 (Arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnl03000
]
130888598 (Arid2)
03021 Transcription machinery [BR:
cnl03021
]
130888598 (Arid2)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130888598 (Arid2)
Transcription factors [BR:
cnl03000
]
Eukaryotic type
Helix-turn-helix
ARID
130888598 (Arid2)
Transcription machinery [BR:
cnl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130888598 (Arid2)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
130888598 (Arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
130888598
NCBI-ProteinID:
XP_057647738
LinkDB
All DBs
Position
17:52887357..53027587
Genome browser
AA seq
1828 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWREKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEDTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVTSTLE
VLYMLTEMGDIACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAIEQVQTQAHVASGPASRTVVTQHAVPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYRCLRTVFPNHTVKRVEDSSNSGQAHIHVIGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVADISPAPSPAGIPHGSQAVGNHFQRTSVTNQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNTPVTVIQNKAPIPCEVVKATVIQ
NSMPQTAVPVSVALGGGPAQSSVVQNHSTGPQPVTVVNSQTLLHHSSVMPQPSSLHTVVP
GQIPSGTPVTVIQQTVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPMHTSSQQTAAGS
QPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQVVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSPTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPAPNNQVPTAMSSSSTLQSQGPPPTVSQMLSVKRQQQQQHSPA
PPTQQVQVQVQQPQQVQMQVQPQQTNAGVAQPASNESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPAG
ISMSGAQAGAGLQVQTLPAGQSPCTTATPPFKGDKIICQKEEEAKEATGLHVHERKIEVM
ENPSCRRGTTNTSNGDTSESEMQVGSLLNGRKYSDSSLPPSNSGKIHSETNQCSLISNGP
SLELGENGASGKQNSEQMDMQDIKSDLKKTLVNGICDFDKGDGSHLSKNIPNHKTSNHVG
NGEISPVELQGTSDATQQDTAKGDQLERVSNGPVLTLGGSPSTSSMQEASSVATQQFSGT
DLPNGPLASSLNSDVPQQRPSVVVSPHSTTPVIQGHQILAVPHSGSRVSHSALSSDVRST
NGTAECKTVKRPAEDNDREAVPGIPNKVGVRIVTISDPNNAGSSATMVAVPAGVNTSTVA
KAAIESAAQQKQQHPPPYIQSVVPQNTPLPPSAAVQVQGQPNSSQPSPLSASSQHADAVR
KPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHL
QDKHCSKDALLAGLKQDEPGQVANQKSSTKQPAIGGTGSAPRAQKAIASHPSAALMALRR
GSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNME
ASSTLAKCLYELNFTVQSKEQEKDSEML
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggaggaagggactggctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccgtttaagaagatccctgcggtg
ggtgggaaggagctggatcttcacgggctctacaccagagtcactactttaggcggattc
gcgaaggtttccgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttatctagaaaagtac
gagaaagttcatcattttggggaagatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaatcccatcttcctacaattaccagcaacacagtgtgtcagat
tatctacgtcaaagttatgggttatctatggattttaactcgccaaatgattataataaa
ctggtgctttcactgttatctggactcccaaatgaggtggactttgctattaacgtgtgt
actctgctatcaaatgagagcaagcacgccatgcagcttgagaaggaccccaaaatcatc
actttattgctcgctaacgctggggtgtttgatgacactttaggatcattctctactgtc
tttggagaagaatggagagagaagactgatagagactttgttaagttttggaaagacatt
gttgatgacaatgaagtgcgtgacctaatttctgacagaaacaagtctcatgaagataca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggtattaatgac
attgaaggacagcgggtacttcagattgcagtgattctgcggaacctttcctttgaggag
ggcaatgtgaagctcttggcagctaatcgcacctgtcttcgtttcctcctactctctgct
catagtcattttatttcattaaggcaattaggccttgacacattaggaaatattgcagct
gagcttttattggaccctgttgatttcaaaactactcatctgatgttccatactgttacg
aaatgcctaatgtcaagggataggtttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgtgttgatttgtgaatatgtggatcaagactcatac
agagagataatttgtcacctcactttgcctgatgtgctacttgtaacctcaacactagag
gtgctgtacatgctcactgaaatgggagatattgcctgcacaaaaattgcaaaagtagaa
aagagcatagacatgctagtgtgtctggtttctatggacattcagatgtttggccctgat
gcactagctgcagtgaaactcgtcgaacatccaagctccagtcatcaagttttatctgaa
attaggccccaagctatagagcaggtccaaacccaggcccatgtagcatctggcccagct
tccagaacagttgtaacacagcatgccgttccacccccaggaatagtggaaatagatagt
gaaaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttcagtc
tcgcgagcagaaatgtattctgagtatctctcaacttgtagtaaattagctcgtggaggc
atcctcacatcaactgggttttacaggtgcctgagaacagtttttccaaatcatacagtg
aagagagtggaggattccagtaacagtggacaggcacatatccatgtaataggagtgaag
cggagggctattccactccccatccagatgtactatcagcagcagccagtttccactcct
gttgtccgtgttgattctgttgctgatatatctccagctccttcacctgcaggaatccct
catggatcgcaagctgtaggaaatcattttcagaggacttctgttaccaatcaatcttcg
aatttgaccgcaacacaaatgtcttttccagtacaaggtgttcatactgtggcacagact
gtttctagaattccgccaaatccttcagttcatacccaccagcaacaaaatactccagtg
actgtcattcagaataaagctccaatcccttgtgaagttgttaaggcaacagtaattcag
aattctatgccccagacagcagttcctgtgagtgttgctctaggaggaggacctgcacag
agttctgtggttcagaatcatagtacagggccacaacctgttacagttgtgaattctcag
acattgcttcaccattcatctgtgatgccacaaccatcgtcattgcatacagtggtacca
ggacagataccttcaggcactcctgttacagtaattcagcaaactgtaccacagagtcat
atatttggaagagtacagaacataccagcatgtacgtctacagtttcacagggtcaacag
ttaatcaccacatcaccacagcctatgcacacttcatctcaacagacagcagctggtagc
cagccacaagacactgttatcatagcacccccacagtatgtaacaacttcagcatccaat
atcgtttcagcaacttcagtccagaatttccaggtagctacaggacaggtggttaccata
gctggtgttccaagtccgcagccctccagggtaggattccagaacattgcacccaaaccg
cttccttctcagcaagtttcaccaacagtggtacagcagcctattcagcaaccacagcag
ccaacccagcaaagtgtagtgattgtaagccagccagctcaacaaggtcagacttatgca
ccagccattcaccaaattgttcttgctaatccggcagctctcccagctggtcagacagtt
cagctaactgggcaaccaaacataactccatcttcttcgccatcacctgtcccagctcct
aataaccaagtccctactgccatgtcatcatcttccactcttcaatcacagggaccacct
cctactgtcagtcaaatgctgtctgtgaagaggcagcaacagcagcagcattcaccagca
cctcccacccagcaggtacaggtacaagttcaacagccacaacaagtacagatgcaagtt
cagccccagcaaacaaatgcaggagttgcccagcctgcatccaatgagtctagtctgata
aaacaactgctgcttccaaagcggggtccctcaaccccagggggtaagcttatcctccca
gcaccacagattcctccccctaacaatgcaagagctcctagccctcaggtggtctatcag
gtggccaataaccaagcagctggttttggagtacaggggcaaactccagctcaacagcta
ttagttggacagcaaaatgttcagttggtccaaagtgcaatgccaccaacagggggagtg
caaaccgtgcccatttcgaacttacaaatattgccgggtccactgatctcaaatagccca
gcaacaattttccaagggacttctggcaaccaggtaaccattacagttgtgccaaatacc
agttttgcaactgcgactgtgagtcagggaaatgcagctcagctcattgctccagcagga
attagcatgagcggagcacaggcgggagccggacttcaggtgcaaacgcttccagctgga
caatcaccatgtaccactgctacccccccattcaaaggcgataaaataatttgccaaaag
gaggaggaagcaaaggaagcaacaggtttacatgttcatgaacggaaaattgaagtcatg
gagaatccgtcttgccgacgaggaactacaaacaccagcaatggggatacaagtgaaagt
gagatgcaggtgggaagtcttttaaatggaagaaagtacagtgactcaagtctacctcct
tcaaactcagggaaaattcacagtgagaccaatcagtgctcactaattagtaatgggcca
tccttggaattaggtgagaatggagcatctggaaaacagaactcagaacaaatggacatg
caggatataaaaagtgatttgaaaaaaacactcgttaatgggatatgtgattttgataaa
ggagatggttctcatttaagcaaaaacattccaaatcacaaaacttctaatcatgtagga
aatggtgagatatctccagtagaactgcaggggacttcagatgctactcagcaagatact
gccaaaggtgatcagctagaaagagtttctaatggacctgtgttaactttgggtgggtca
ccgtccacaagcagtatgcaggaagcttcaagtgtggcaacacagcaattcagtggtact
gatttgcctaatggacctctagcttcaagtttgaattcagatgtgcctcagcaacgccca
agtgtggttgtctcaccacattctacaacccctgttatacagggtcatcaaatcctcgcc
gtcccccactcaggatctagagtgtcccattctgccctatcatctgatgttcggtctaca
aatggcacagctgaatgcaaaactgtaaagaggccagcagaagataatgatagggaagca
gtcccaggaattccaaataaagtaggagttagaattgttacaatcagtgaccccaacaat
gctggcagcagtgcaacgatggttgctgtaccagcaggagtgaatacaagcactgtagct
aaagcggcaatagaaagtgctgctcagcagaagcagcagcacccaccaccctacatacag
agtgtggttccacagaacactcctctgccaccttcagcagctgtacaagtacagggccag
cctaacagttctcagccttctccactcagtgcatccagtcagcatgcagatgccgtgaga
aaacctgggcagaacttcatgtgtctatggcagtcttgtaaaaagtggtttcagacaccc
tcacaggtgttctaccatgcagctactgaacatggaggaaaagacgtctacccagggcag
tgtctttgggaaggttgtgagccttttcagcggcagaggttttcttttattacccactta
caggataagcactgttcaaaggatgctctgcttgcaggattaaaacaagatgaaccagga
caagtggcaaatcaaaaatcttctaccaagcagccagctatagggggcacaggctcagct
cctagagcacagaaggccattgccagtcaccccagcgccgcactcatggctcttaggaga
ggctcaaggaaccttgtcttccgggactttacagatgaaaaagagggaccaataactaaa
cacatccgactaacagctgccttaatattaaaaaatattggtaaatattcagagtgtggg
cgcagattgttaaagagacatgaaaacaacttatcagtgctagccattagtaacatggaa
gcttcctccacccttgccaaatgcctttatgaacttaattttacagttcagagtaaagaa
caagaaaaagactcagaaatgctgtag
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integrated database retrieval system
