Chionomys nivalis (European snow vole): 130888643
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Entry
130888643 CDS
T11437
Symbol
Shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
130888643 (Shank3)
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NCBI-GeneID:
130888643
NCBI-ProteinID:
XP_057647861
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Position
17:46340495..46400292
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AA seq
1807 aa
AA seq
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MQLNRAAVAAAAAPAEPPEPLSPALAPAPAPPGPLPRSAVGGAPAGGQGGPGRRAESPCA
PLSAGNSPGPGASTGMDGPGASAVVVRVGIPDLQQTKCLRLDPTAPVWAAKQRVLCALNH
SLQDALNYGLFQPPSRGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDDK
QFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDL
LKVLRNGGAHLDFRTRDGLTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTPLYHSAL
GGGDALCCELLLHDHAHLGTTDENGWQEIHQACRFGHVQHLEHLLFYGANMGAQNASGNT
ALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVP
FRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGDAQPAASPGPTLRSLPHQLLLQRL
QEEKDRDRDSEPEKDIGGPAAGRGSHNKISPSGPGGSGPAPGPGPASPAPPAPPPRGPKR
KLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCV
EEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAILQKRDHEGFGFV
LRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQ
VVGLIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELAS
IRRRKGEKLDEILAVAAEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPG
PEKLPGSLRKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRGIPPPPQTAPPPPP
APYYFDSGPPPTFSPPPPPGRAFDTVRSSFKPGLEARLGAGAAGLYDSGAPLGPLPYPER
QKRARSMIILQDSAPEVGDVPRPVPAATPPERPKRRPRPSGPDSPYANLGAFSASLFAPS
KPQRRKSPLVKQLQVEDAQERAALAVGSPGPVGGSFARDPSPTHRGPRPGGLDYGSGEGL
GLAFGGPGPGPGKERRLEERRRSTVFLSVGAIEGSPPSAELPSLQPSRSIDERILGTGAP
TGRDLLLPSPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQT
PSRSPTPVHSPDADRPGPLFVDVQTRDSERGPLASPAFSPRSPAWIPVPARREAEKSPRE
ERKSPEDKKSMILSVLDTSLQRPAGLIVVHATSNGQEPNRLGAEEERPGTPELAPAPMQA
ATVAEPMPSPRAQPPGSIPSDPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARI
GLVPPPEEFANGILLATPPPGPGPLPTTVPSPASGKPSSELPPAPESAADSGVEEADTRS
SSDPHLETTSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGK
GPVTFRDPLLKQSSDSELMAQQHHAASTGLASAAGPARPRYLFQRRSKLWGDPVESRGLP
GPEDDKPTVISELSSRLQQLNKDTRSLGEEPVGGLGSLLDPAKKSSPIAAARLFSSLGEL
STISAQRSPGGPGGGASYSVRPSGRYPVARRAPSPVKPASLERVEGLGAGVGGAGRPFGL
TPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPSPGSGPSAGPRRPFQQKP
LQLWSKFDVGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERA
LRQLDGS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgcagctaaaccgtgccgccgtcgccgccgccgctgcgcctgcggagcccccggagccg
ctgtcccccgcgctggccccggccccggccccccccggccccctcccgcgtagcgcggtc
ggcggggctccggcggggggtcagggggggccagggcgccgcgcggaatccccgtgcgct
cctctctccgccggcaacagtccgggccccggcgctagcaccgggatggacggccccggg
gccagcgccgtggtcgtgcgcgtcggcatcccggacctgcaacaaacgaagtgcctgcgt
ctggacccaaccgcgcccgtgtgggccgccaagcagcgtgtgctctgcgccctcaaccac
agccttcaggacgcgctcaactacgggctattccagccgccctctcggggtcgcgccggc
aagttcctggatgaagagcggctcttacaggactacccgcctaacctggacacgcccctg
ccctatctggagtttcgatacaagcggagagtttacgcccagaacctcatagatgacaag
cagtttgcaaagctgcacacaaaggcaaacctgaagaagttcatggactatgtccagcta
cacagcactgacaaggtggcccgcctgctggacaaggggctggaccccaattttcatgac
cctgactcaggagagtgccctctgagccttgcggcacagttggacaatgccactgacctc
ctgaaggttcttcgcaatggcggtgctcacctggacttccgaacccgtgatgggctaaca
gctgtccactgcgccacccgccagaggaatgcaggggcattgacgaccctgctggacctg
ggggcttcacctgactacaaggacagccgcggcctgacgcccctgtaccatagtgcccta
gggggcggagatgccctctgctgtgagctgctgctccatgaccatgcacatctggggacc
accgatgagaatggctggcaggaaatccatcaggcctgccgctttgggcacgtgcagcac
ttggagcacttgctgttctatggggccaacatgggtgcccagaatgcctcgggaaacaca
gccttgcacatctgtgccctctacaaccaggagagctgcgctcgtgtcctgcttttccgt
ggtgccaacaaggacgtccgcaattacaacagccagacggccttccaggtggccattatt
gcagggaactttgagctcgctgaggtaatcaagacccacaaagactcggatgtcgtacca
ttcagggaaacccccagctatgcaaagcgacgacgtctggctggcccaagcggcttggca
tcccctcgacccttacagcgctcagccagtgatatcaacctgaaaggcgatgcccagccc
gcagcttctcctgggcccactctccgaagcctccctcatcaactgctgcttcagcggctt
caggaggagaaagaccgggacagggatagtgagccggaaaaggacatcggtggccctgca
gcaggcaggggtagccacaacaagatcagccccagcgggcccggcggatccggccccgcg
cccggccccggcccggcgtctcccgcgccccccgcgccgccgccccggggcccgaagcgg
aaactttacagtgccgtccccggccgcaagttcatcgctgtgaaggcgcacagcccgcag
ggcgagggcgagatcccactgcaccgcggcgaggccgtgaaggtgctcagcattggggag
ggcggtttctgggagggaaccgtgaagggccgtactggctggttcccagctgactgtgtg
gaggaagtgcagatgcgacagtatgatacacggcacgaaacccgagaagaccggacaaaa
cgtctcttccgtcactacactgtgggttcctatgacagcctcacttcacacagtgattat
gtcatagatgacaaggtggctatcctgcaaaaacgggaccatgagggttttggcttcgtt
ctccggggagccaaagcagagacccccattgaggaatttacacccacacccgccttccct
gcactccagtacctggagtctgtagatgtggaaggtgtggcctggagggccgggcttcga
actggggacttcctcatcgaggtgaatggagtcaacgtcgtgaaggtcggacacaagcaa
gtagtgggtctcatccgtcagggcggcaaccgcttggtcatgaaagtcgtgtccgtgacc
aggaaacccgaagaggatggtgctcggcgcagagccccaccacccccaaagagggccccc
agcaccacgctgaccctgcgctccaagtccatgacggctgagctcgaagaactcgcttcc
attcggagaagaaaaggggaaaagttggatgagatcctggcagttgctgcggagccgacc
ctgaggccagacattgcagatgctgactccagggcagccactgtcaagcagcggcccacc
agtcggaggattacccctgccgagatcagctcattgtttgagcgccagggcctcccaggc
ccagagaagctgccgggctctctgcggaaggggattccacggaccaaatctgtaggggag
gacgagaagctggcatccctactggaagggcgcttcccacgcagcacatcaatgcaggac
acagtgcgtgaaggtcgtggcattccaccccctccgcagaccgctccaccacccccaccc
gcgccctactacttcgactccgggccacctcccacattctcaccgccgccaccgccaggc
cgagcctttgacactgtgcgctccagcttcaagccaggcctggaggctcgccttggagcg
ggggccgctggtctgtatgattctggagctcctctgggcccgctgccctaccctgagcgt
cagaagcgtgcgcgctccatgatcatcttgcaggactctgcgccagaagtgggcgatgtc
ccccggcccgtgcctgcagctacaccgcctgagcgccccaagcgccggcctcgaccgtcc
ggccctgatagcccttatgccaacctgggcgccttcagtgccagtctctttgctccgtca
aaaccacagcgccgcaagagcccactggtgaagcagcttcaggtggaggacgctcaggag
cgcgcggccctggccgtgggtagcccgggtccagtgggtggaagctttgcacgagatccc
tccccaacgcaccgtgggccccggcccggtggccttgactacggctctggagaaggtctg
gggctcgcttttggcggccctggccctggccccggcaaggagcggcgcctggaggagcga
cgccgttccactgtgttcctatctgtgggtgccatcgagggtagccctcccagcgcagag
ctgccatccctccagccctcccgctccattgatgagcgcatcctagggacaggcgccccc
actggccgtgatttgctgctcccctcccctgtctcagctctgaagccattggtcagtggc
cctagccttgggccctcaggctccactttcatccaccctctcactggcaaacccttggat
cctagctcacccctagcccttgctctggctgcccgagagcgggctctggcctcgcaaacg
ccttcccggtcccccacacctgtgcacagccctgatgctgaccgccctggacccctcttt
gtggatgttcagacccgagactccgagcgagggccgttggcttcaccagccttctcccct
cggagcccagcctggattccggtgcctgctcgcagagaggcagagaaatcccctcgggaa
gagcggaagtcaccagaggacaagaaatccatgatcctcagcgtcttggacacgtccttg
cagcggccagctggtcttattgttgtgcatgccaccagcaatggacaggagcccaacagg
ctgggggctgaagaggagcgcccgggtactccggagctggccccagcccccatgcaggct
gcaactgtggccgagcctatgccaagcccccgggcccagccccctggcagcatcccatca
gatcccgggccaggccaaggtagctcagaggaagagccagagctggtatttgctgtgaac
ctgccacctgctcagctgtcctccagcgatgaagaaactagggaggagctggcccgcatt
gggctagtaccaccccccgaagagtttgccaatgggatcctgctggccaccccgccccct
ggaccgggccccttgcccaccacggtacccagcccggcctcagggaagcccagcagtgag
ctgccccctgcccccgagtctgcagctgactctggagtagaggaggctgacactcgaagc
tccagtgacccccatctggagaccacaagcaccatttccacagtgtccagcatgtccacc
ctgagctcggagagtggggaactcactgacacccacacctcctttgccgatggacacact
tttctactcgagaagccaccagtgcctcccaagcccaagctcaagtccccgctggggaag
gggccggtgaccttcagggacccgttgctgaagcaatcctcggacagtgagctcatggcc
cagcagcaccatgctgcctctactgggttggcttctgctgctgggcctgcccgccctcgc
tacctcttccagagaaggtccaagctgtggggggaccccgtggagagtcgggggctccct
gggcctgaagatgacaaaccaactgtgatcagtgagctcagctcccgtctgcagcagctg
aacaaagacacacgctccttgggggaggaacccgttggtggcctgggcagcctgctggac
cctgctaagaagtcgtcgcccattgcagcagctcggctcttcagcagcctcggtgagctg
agcaccatctcagcgcagcgcagccccgggggcccgggcggaggggcctcctactcggtg
cggcccagcggccggtaccccgtggcgagacgagccccgagcccagtgaagcccgcatcg
ctggagcgggtggaggggctgggggcgggtgtgggaggcgcggggcggcccttcggcctc
acgcctcccaccatcctcaagtcgtccagcctctccatcccgcacgaacccaaggaagtg
cgcttcgtggtgcgaagtgtgagtgcgcgcagccgctccccctcgccatctccgctgccc
tcgccttctcccggctctggccccagtgctggcccccgtaggccattccagcagaaaccc
ctgcagctctggagcaagttcgatgtgggcgactggttggagagcatccacttgggcgag
caccgagaccgcttcgaggaccatgagatcgaaggcgcacacctgcctgcgctcaccaag
gacgacttcgtggagctgggcgtcacacgcgttggccaccgcatgaacatcgagcgtgcg
ctcaggcagctggatggcagctga
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integrated database retrieval system
