Chionomys nivalis (European snow vole): 130888730
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Entry
130888730 CDS
T11437
Symbol
Col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
130888730 (Col14a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cnl00535
]
130888730 (Col14a1)
Proteoglycans [BR:
cnl00535
]
Extracellular matrix (ECM) proteoglycans
Others
130888730 (Col14a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_PBP1
NDNF
Motif
Other DBs
NCBI-GeneID:
130888730
NCBI-ProteinID:
XP_057648012
LinkDB
All DBs
Position
17
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AA seq
1797 aa
AA seq
DB search
MKIFQREMRYWLLLAFLAVAYFCTIVGSQVAPPTRLRYNVISHDSIQISWKAPRGKFGGY
KLLVAPASGGKTNQLNLQNAATKAIIQGLLPEQNYTVQLIAYNKDKESKPAQGQFRIKDL
EKRKDPTKPRVKVVDKGNGSKPTSPEEIKFFCETPAIADIVILVDGSWSIGRFNFRLVRN
FLENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNAFNTKDEVIDAVRSLPYKGGNTLTGL
ALNFIFENSFKPEAGSRSGVPKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADL
NELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDKEIKASALATIGPPTEL
MTSEVTARSFMVNWTHTPGKVEKYRVVYYPTRGGKPEEVVVDGSVSSVVLKNLMSSTEYQ
IAVFAVSAHTASEALRGTETTLALPMASDLELYDVTESSMRVKWDAVPGATGYLILYAPL
TEGLAGDEKEMKIGETHTDIELSGLFPNTEYTVTVYAMFGEEASDPATGQATTLSLTPPR
NLRISNVGSNSARLTWDPTSGKINGYRIVYTSADGTEINEVEVDPVTTFPLKGLTPLTEY
SVAIFSIYEEGQSLPLVGDFTTEEVPAQQYLEIDEVKTDSFRVTWHPLSAEEGQHKLMWI
PVYGGKTQEVALKEEQDSYVVEGLDPGTEYEVSLLAVLDDGSESEVVTAVGTTLDDFWTQ
APTTVEPTSPVTSVLQTGIRNLVVDDETATSLRVTWDISDSNVEQFRVTYLTAQGDPMEE
VVGTVLVPGMQNNILLKTLIPDTEYKVTVTPIYTTGEGVSVSAPGRTLPSSGPQNLRVSE
EWYNRLRITWDPPSAPVKGYRIVYKPVSVPGQTLETFVGADINTIVITNLLSGMDYNVKI
FASQATGYSDALTGLVKTLFLGVTDLQAHQVETTSLCARWQIHRHATAYRIVLESLQDTQ
AQESTLGGGVNRHCFYGLQPDSDYKISVYTKLQEIEGPSVSIMQRTQSLPTEPPTFAPTI
PPAKEVCKAAKADLVFMVDGSWSIGDDNFNKIINFLYSTVGALDKIGADGTQVAMVQFTD
DPRTEFKLDAYKTKETLLDAIRHISYKGGNTKTGKAIKYVRDTLFTAESGTRRGIPKVIV
VITDGRSQDDVNKISREMQADGYNIFAIGVADADYAELVRIGSKPSARHVFFVDDFDAFK
KIEDELITFVCETASATCPMVHKDGIDLAGFKMMEMFGLVEKDFSAVEGVSMEPGTFNLF
PCYQIHKDALVSQPTKYLHPEGLPSDYTMSFLFRILPDTPQEPFALWEILNKNSDPLVGI
ILDNGGKTLTYFNYDYTGDFQTVTFEGPDIRKMFYGSFHKLHVVISKTMAKVVVDCKEVG
QKAINASANLTSDGVEVLGRMVRSRGPHGNSAPFQLQMFDIVCSTTWANKDRCCELPGLR
DEEACPDLPRSCSCSETNEVALGPAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPVGP
QGPPGPQGPSGLSIQGMPGMPGDKGDKGDAGLPGPQGVPGGVGSPGRDGSPGQRGFPGKD
GSSGPPGPPGPIGIPGAPGVPGIMGSMGPQGASGPPGVPGPKGERGERGDLQSQAMVRAV
ARQVCEQLIQSHMARYTAILNQIPSHSSSIRTIQGPPGEPGRPGSPGTPGDQGPPGAPGF
PGNAGVPGTPGERGLTGLKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRG
PPGHLGVPGPQGPSGQPGYCDPSSCSAYGVGVSHPDQPEFTPVQDEQEAMDLWSSSI
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttcagcgggagatgcggtactggctgcttctggcttttttggcggttgct
tatttctgtaccatcgtcgggagtcaagtggctcctcccacaaggttaagatacaatgta
atatcccacgacagtatacagatttcatggaaagctcccagagggaaatttggtggatac
aaactgctcgtggctccagcttcaggggggaaaaccaaccagctgaatctgcagaacgct
gcaacaaaagcgattatccaaggccttctgccagagcaaaattacacggttcagcttatc
gcctacaataaagacaaagaaagcaaaccggctcaaggccagttcagaattaaagattta
gagaaaagaaaggatccgacaaagcccagagtcaaggttgtggacaaaggaaatggaagt
aaaccaacttcaccagaagagataaaattcttctgcgagactccagccatcgctgacatt
gttatcctggttgatgggtcgtggagtattgggagattcaacttcaggctggtgcgaaat
ttcttggaaaacctggtcacagcgttcaacgtgggctcagagaagacacggattggcttg
gcacaatacagtggggaccccagaatagagtggcacttgaacgcctttaacacaaaagat
gaagtgatcgatgctgtccgaagccttccctacaaaggaggaaacaccctaacaggcctt
gctctgaacttcatttttgagaatagctttaagccagaagcaggatcaaggagtggagtt
cccaagatcggcattttaatcacagatggaaaatcccaagatgacattatcccgccatcc
agaaacctccgggagtctggtgtagagctctttgccataggggttaaaaatgctgacctg
aatgagctgcaggagatcgcctctgagccagacagcactcacgtctacaatgttgctgaa
ttcgacctgatgcacacggtagtggagagcctgaccaggactgtgtgctccagagtggaa
gagcaagacaaggagattaaagcctcagcccttgccactattgggcctcctacagagctg
atgacttctgaagtcaccgccaggagctttatggttaattggactcacaccccaggaaaa
gtggaaaagtacagagtggtgtattatcccacccgaggtgggaaaccggaggaggtggtg
gtggatggaagtgtgtcttctgtagtgttgaaaaacttgatgtcatcgaccgagtatcag
atagcagtgttcgctgtatctgcccacacagccagtgaagccctgcggggaacggaaacc
acattggccttacccatggcttccgacctggagctgtacgatgtgaccgagagcagcatg
cgtgtcaagtgggacgcggtgcctggcgccacgggctatctgatcctctatgctcctctc
acagaagggctggcgggggatgagaaagagatgaaaatcggagagacccacacagacatt
gagctgagcggcctgttccccaacacagaatatacagtcaccgtgtacgccatgtttgga
gaagaggccagcgaccctgctacagggcaagcgacaaccctgtccttaaccccaccaaga
aatctgagaatctccaacgttggctctaatagtgcccggttaacctgggaccccacatcg
ggaaagatcaatggttacaggattgtgtataccagtgcagatgggacagaaatcaacgag
gttgaagttgatcccgttactacgttccccctgaaaggcttgacccccctcacggagtac
tctgttgccattttctccatctatgaggaggggcagtccctgcctctggttggagacttt
acgacagaggaagttcctgcccagcaatacttggaaattgatgaggtaaagacagacagt
ttccgggtgacctggcatccgctctcggctgaggaagggcaacacaaactcatgtggatt
ccagtctatggcgggaagactcaggaggttgccctcaaggaagagcaggactcctatgtt
gttgaaggcctggaccctggaactgagtatgaagtctcactgttagctgtgctcgatgat
ggcagtgagagcgaggtggtgactgctgttgggaccacactcgatgacttttggacacaa
gcacccacaactgtagaacctaccagccctgtgacttcagttctccagacgggaatcaga
aacctggttgtagatgatgaaactgctactagcctgcgagtcacatgggacatttctgac
agcaatgtggagcagtttcgggtgacctacctgacagcccaaggggaccctatggaagaa
gtggtaggaacggttctggtgcctggaatgcagaacaatatccttctgaagactctaatt
ccagacaccgaatacaaagtcacggtgactcccatctacacaaccggagaaggcgtcagc
gtctccgcccctgggagaactttgccatcttctggacctcaaaacttacgggtctcggaa
gaatggtacaaccggttgcgcattacatgggacccaccgtctgctcctgtgaagggctat
aggattgtctacaaacctgtgagcgttcctggtcaaactctggagacgttcgtgggcgcc
gacattaacaccattgttatcaccaatctcctcagtgggatggactataacgtgaagata
tttgcttcccaggccacaggctacagcgacgctctgactggcctcgtgaaaaccctgttc
ttaggtgtgacggatctccaagcccatcaggttgaaacaacaagcttgtgtgctcggtgg
caaatacaccgccatgccacagcctataggatagttctagaatcccttcaggatacacaa
gcacaagaatctaccttggggggaggtgtaaacaggcattgcttctatggacttcagcca
gattcagactataaaatcagtgtttatacgaagctccaggagattgagggaccaagtgta
agcatcatgcaaagaacacaatcacttcccaccgagccaccaacgtttgctccaaccatt
ccaccagcaaaggaagtatgtaaagcagccaaggcagacctagtgttcatggtggacgga
tcctggagtattggcgatgacaatttcaataagatcatcaattttctgtatagcaccgtg
ggagccctggacaagattggtgcagatggaactcaggtggcaatggttcagttcactgat
gaccccagaacagaattcaaactcgatgcttacaaaaccaaagagacacttcttgacgca
atcagacacatttcctacaaaggaggaaatactaaaacaggaaaagctatcaagtacgtt
cgcgataccttgttcactgcggagtcaggtacgaggagaggcatcccgaaggttatcgtg
gttatcactgatggaagatcacaagatgatgtcaacaaaatctccagggagatgcaggcc
gatggttacaacatctttgccatcggtgtggccgatgccgattatgcagagttggttcgg
attggcagcaaacccagcgcacgccatgtcttcttcgtggatgacttcgatgccttcaag
aaaattgaagatgaattaattacttttgtctgtgaaaccgcatcagcaacctgcccaatg
gtgcacaaggacggaatcgacctcgcaggatttaagatgatggaaatgtttggtttagtt
gaaaaggatttttctgcagtagaaggagtttctatggaacctggcaccttcaatttgttc
ccatgctatcaaatccacaaagatgctctggtttcccagccaaccaagtatctgcatccg
gaagggctgccttctgactacacaatgagtttcctgttccggattcttcctgacacacca
caggagccatttgctctttgggagattttaaataaaaattctgacccactggttgggatc
attttagacaatggagggaaaactctgacttatttcaactatgactatactggagatttt
caaactgttacttttgaaggacctgacatcaggaaaatgttctatggaagctttcataag
ctccatgttgttatcagcaagaccatggccaaagtggtcgttgactgtaaggaagtgggc
cagaaggcaatcaacgcatccgccaatctcacgtcggatggtgtggaagtcctgggaaga
atggtcagatccagaggaccccacggaaactctgcaccattccagttacagatgtttgat
attgtttgctctacaacgtgggccaataaagacagatgctgtgaacttcccggcctgagg
gatgaagaggcttgcccagacctcccacgatcctgctcttgctcagaaactaacgaagtg
gctctaggaccagctggtcccccaggtggtccaggactccgaggaccaaaaggccaacaa
ggtgaacagggtccgaagggaccagagggccctcggggggaaacaggtcctgtagggcct
cagggtccccccggaccccaaggacccagtggtctgtccattcaaggcatgcctggtatg
cccggtgacaaaggagataaaggagatgctggccttcctggtccacagggtgtccctgga
ggtgtgggttcaccaggacgtgatggctcaccaggccagaggggatttcctggaaaggat
ggttcttctggtcctccagggccacccgggccaattggcattcctggagcccctggtgtc
ccagggatcatgggaagcatgggaccacaaggagcctcggggccgcctggtgtccctgga
ccaaagggagagcgaggtgaacgaggagacctgcaatctcaggccatggtgagggcagtg
gcacgccaagtgtgtgagcagctcatccagagtcatatggccaggtacacggccatcctc
aaccagattcccagccattcctcatccatccggaccatccagggccctcccggggagcct
gggagaccaggttcacctggaacccctggagaccaaggacccccaggtgccccaggcttc
ccgggcaatgcaggtgtgccggggaccccaggagaacgaggtctaaccggtctcaaagga
gagaaaggcaatccaggcattggaactcaaggccccagaggtccccctggaccagcagga
ccctcaggggaaagtcgtcctggcagtcctgggccacctggctctcctggaccaaggggt
cccccaggtcacctgggagtacctggaccacagggtccttctggccagcctggatattgt
gacccatcgtcatgttctgcctacggtgttggagtgtcccatccggatcagcctgaattc
accccggtccaggatgagcaggaggccatggatctgtggagctcgagcatctga
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integrated database retrieval system
