Chionomys nivalis (European snow vole): 130889610
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Entry
130889610 CDS
T11437
Symbol
Rorc
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04659
Th17 cell differentiation
cnl04710
Circadian rhythm
cnl05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
130889610 (Rorc)
09159 Environmental adaptation
04710 Circadian rhythm
130889610 (Rorc)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
130889610 (Rorc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnl03000
]
130889610 (Rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cnl03310
]
130889610 (Rorc)
Transcription factors [BR:
cnl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130889610 (Rorc)
Nuclear receptors [BR:
cnl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
130889610 (Rorc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130889610
NCBI-ProteinID:
XP_057649445
LinkDB
All DBs
Position
18
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AA seq
517 aa
AA seq
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MDRAPQRQHRTSRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQRQQQQQQQEQVAKTPPAEGHGADTLTYTLGLPDGQLPLGASPDLPEASACPPGLLR
ASGSGPPYSNNLAKTEVQGASCHLEYSPEQGKAEGRNSVYSTDSQLTSGRRGLHFEGARH
PELGEPEKGPDSHCSPSFCSAPEAPYASLTDIEYLVQNVCKSYRETCQLRLEDLLRQRTN
LFSREEVTSYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIILLKAGAM
EVVLVRMCRAYNADNHTVFFEGKYGGVELFRALGCSELISSIFDFSHFLSALRFSEDEIA
LYTALVLINANRPGLQEKRRVEHLQYSLELAFHHHLCKTHRQGLLAKLPPKGKLRSLCSQ
HVEKLQLFQRLHPIVVQAAFPPLYKELFSADFEPPRG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacagcaccgaacttctcgggaacttctggctgcaaagaag
actcatacttcacaaattgaagtaataccttgcaagatctgtggggataagtcatctggg
atccactatggggtcatcacctgtgaggggtgcaagggcttctttcgccgcagccagcag
tgcaatgtggcctactcctgcacccgtcagcagaactgccctattgaccgcaccagccgc
aaccgatgccaacactgccgcctgcagaagtgcctggctctgggcatgtcccgagatgct
gttaagttcggccgaatgtccaagaagcagagggacagtctccatgcagaagtgcagaaa
cagctgcagcagcggcagcagcaacagcagcaacaggaacaagtggccaagactcctcca
gcagaaggccatggagcagatacccttacatatactttggggctcccagatggacagcta
ccactgggtgcctcacctgacctgcctgaggcctctgcttgtccccctggtctcctgaga
gcctcaggctctgggcccccatattccaacaacttggccaaaacagaggtccaaggagcc
tcctgccaccttgagtatagcccagagcaaggcaaagctgaaggcagaaacagcgtctac
agcacagacagccagcttacttctggaagacgtggacttcattttgagggagccaggcat
cctgagcttggggaaccagaaaagggtccagacagccactgcagtcccagtttctgcagc
gccccagaggcaccgtacgcctctctgacagacatagagtacctggtacagaatgtctgc
aagtcctaccgagagacatgccagctgcggctggaggacctgctacggcaacgcaccaac
ctcttctccagggaggaggtgaccagctaccagaggaagtccatgtgggagatgtgggag
cgttgtgcccaccacctcactgaggccattcagtatgtggtggagtttgccaagcggctc
tcgggcttcatggagctctgccagaatgaccagatcatactactgaaagcaggagcgatg
gaagtcgtgctcgtgaggatgtgccgggcctacaacgctgacaaccacacagtcttcttt
gaaggcaaatatggcggcgtggagctgttccgagccttgggctgcagcgagctcatcagt
tccatattcgacttttcccacttcctcagtgccttgcgtttctctgaggatgagatcgcc
ctctacacggccctggttctcatcaatgccaaccggcctgggctccaagagaaaaggaga
gtggagcatctgcaatacagtctggagctggccttccatcatcatctctgcaagacccat
cgccaaggcctcctagccaagctgccacccaaagggaaactccggagcctgtgcagccaa
cacgtggagaagctgcagctcttccagcgcctccaccccatcgtagtccaagctgccttc
cctcctctctacaaggagctcttcagcgctgactttgagcccccgaggggctaa
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