Chionomys nivalis (European snow vole): 130889639
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Entry
130889639 CDS
T11437
Symbol
Prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130889639 (Prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnl03041
]
130889639 (Prpf38b)
Spliceosome [BR:
cnl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130889639 (Prpf38b)
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Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
130889639
NCBI-ProteinID:
XP_057649488
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Position
18:complement(23120200..23129673)
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AA seq
541 aa
AA seq
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MANNSPALTGNSQPQHQAAAAVAQQQQPCGGGGATKPAVSGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFEP
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKM
KKDGKEGVEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGERDRERSRERSKEQRSRGEGEEKKHKEDKEDRRHRDDKKESKKKH
SRSRSRERKHRSRSRSRNAGKRSRSRSKDKSSKHKNESKEKSNKRSRSGSQGRTGSVEKL
RKREHSPSKEKSRKRSRSQDRSHKRDHGDGKDQSDRQDHQRSQSVEPESQEREHKNKDET
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcaaccgcagcaccaggcggccgcg
gccgtggcccagcagcagcagccatgcggcggcggcggcgccaccaagccggcggtgtcg
ggcaagcagggcaacgtgctgccgctgtggggcaacgagaagaccatgaacctcaacccc
atgatcctcaccaacatcctgtcgtcgccttacttcaaagtgcagctttacgagctcaag
acctaccacgaggtggtggacgagatctactttaaggtcacacatgttgagccgtgggag
aaaggaagcaggaagacagctggccagacggggatgtgcggaggggttcgaggtgttgga
acaggaggcattgtttctaccgctttttgtctgttatacaaattattcaccctgaagtta
actcgaaagcaagtgatgggtctcataacacatacagactctccgtatatcagagccctt
ggatttatgtatataaggtatacacaaccccctacagacctgtgggactggtttgagccc
ttccttgatgatgaggaggacctagatgtgaaagctggcggaggctgcgtgatgaccatt
ggagagatgcttcgctcctttctcacaaaactggagtggttctctacgttgtttccaaga
atcccagttccagttcagaagaatattgatcaacagattaagacccggcctaggaagatg
aaaaaagatggcaaggaaggggttgaggagatagacagacatgttgagcgccggcggtcc
aggtctccaaggagatcactgagtccacggagatctccaagaagatccagaagtagaagt
catcaccgggagggccatggatcttctagttttgacagagaattagaaagagagaaagaa
cggcagcgactagagcgggaagccaaagagagagagaaggaaaggcgaagatcccgaagt
attgatcgggggttagagcgcaggcgcagccggagtagggaaaggcatagaagtcgcagt
cgaagtcgtgataggaaaggggatagaagagacagggatcgggaaagagagaaagaaaat
gagagaggtcgaagacgagatcgagattatgataaagagagaggagaaagggaccgggag
agatcgagagagcgctccaaggaacagaggagtaggggtgagggagaggagaagaagcac
aaagaagacaaggaggataggcgacacagagacgacaaaaaagagtccaagaaaaaacac
agcagaagtagaagcagagaaaggaaacacagaagtagaagcagaagcagaaatgcaggg
aaacggagcaggagcaggagcaaagacaagtcaagcaaacataaaaacgaaagcaaagaa
aagtcaaataaaagaagcagaagtggcagtcaaggaagaactggcagtgttgaaaaattg
agaaaacgagaacacagccctagcaaagaaaagtctagaaagcgcagccgaagccaagac
cgctcccacaagagagatcatggggatggcaaggaccagtcagacagacaggatcatcag
aggagccagagtgtagagccagagagccaagaaagagaacataaaaacaaagatgagact
gtgtga
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