Chionomys nivalis (European snow vole): 130889789
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Entry
130889789 CDS
T11437
Symbol
Col25a1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
130889789 (Col25a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cnl00536
]
130889789 (Col25a1)
Glycosaminoglycan binding proteins [BR:
cnl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130889789 (Col25a1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130889789
NCBI-ProteinID:
XP_057649706
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Position
18:40336450..40726855
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AA seq
693 aa
AA seq
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MLVKKLAGKGGGREPGSEDPRPLGQRCAGTMASCAALATLLSVVAVVFCLYLGVKTNDLQ
ARIAALESAKGTPSFRPPPDTMDELKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
PPGQKGSTGAPGTPGMNGQKGEPGSPGEAGQSGLPGPKGEPGKEGEKGDAGENGPKGDAG
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGERGEAGPPGRGERGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGALGPRGPPGQK
GDPGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGVDGEQGL
KGAKGDVGDPGMPGEKGGIGLPGLPGANGVKGEKGDSGLPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGADGPIGPH
GPAGPKGERGEKGAVGEPGPRGPYGLPGKNGEPGLDGFPGPRGEKGDLGEKGEKGFRGVK
GEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgaagaagcttgcaggaaaaggagggggaagagagcctggatcagaagatccg
cgccccttgggacagcgttgtgccggcaccatggcctcgtgcgcggccctggcgaccctc
ttgtcagtggttgcggtggtgttttgcttgtatcttggggtgaaaaccaacgacctccag
gcgaggattgccgctcttgaatctgccaaaggaaccccttcctttcgtccgccgcctgac
accatggatgagctgaaggctatggttcaggagaaagtggagcgtctcttggctcagaaa
tcctatgaacacatggctaaaataaggatcgccagagaggcaccttcagagtgcaactgc
ccggcaggtcctccggggaaacgagggaagagaggccgaagaggagagtctggtcctcct
ggtcagcccggtccccagggcccccctggtccaaaaggtgataagggagaacaaggcgat
caggggcctcggatggtgtttcctaagatcaatcatggctttctctctgctgatcagcag
ctcattaaacggcggctgattaagggtgaccaaggacaagcagggcctccaggaccccca
ggtcctcctggtccaagaggcccacctggggacacaggaaaggatggcccccgagggatg
ccaggagtacccggtgaaccagggaaaccaggagaacaaggcttgatgggacctctgggg
cctccaggacaaaagggttccactggagcacctgggaccccaggcatgaatgggcagaag
ggtgagcctggatcacctggagaagcagggcagagtggactcccaggaccaaagggggaa
cctggaaaagaaggagagaagggagatgctggagaaaatggccccaaaggtgatgcagga
gaaaagggtgacccaggatcatcggctgcaggaattaagggagaacctggagaatctggt
cgtccaggacaaaagggtgagccagggctgcctggactacctggactcccggggatcaag
ggagaaccaggcttcattggtcctcaaggagagccgggcttaccagggttaccaggaaca
aaaggtgaacgtggagaggcagggcctcctggaagaggcgaacgaggagacccgggagcc
ccaggaccaaaggggaaacaaggtgaatcaggagctagaggcccaaaggggtcaaagggt
gatcgtggagacaaaggagactctggagctctgggaccccggggtccacctgggcaaaag
ggagatccaggagctactgagatcatagactacaatggcaacctccacgaggccttacag
aggattaccaccttaactgtcacgggcccccctggacctcctggacctcaaggactacaa
gggccaaagggtgagcaaggatctccaggaattcccggagttgatggagaacagggtctc
aaaggcgccaagggagatgtgggggacccagggatgccaggtgaaaaaggaggcattgga
cttcctggattgccgggtgccaatggagtaaaaggagaaaaaggagactctgggttgccg
gggcctcagggtccttctatcataggcccaccaggcccgccaggtccccatggcccacct
ggccccatgggaccccacggacttcctggaccaaagggtgaaccagggttaaatggtgtt
aaaggattgaagggtgaaccaggtcaaaagggtgacagaggaccccttggtcttccagga
gcatctggcttagacggaaagccaggatcccggggtgcagatggtcccataggaccccat
ggccctgcaggtcccaaaggagaaagaggagagaagggagctgtgggagagcctggaccc
agaggaccctatgggctgcctggtaaaaatggagagcctggtcttgatggcttccctggt
cctcgaggcgagaagggtgacctgggagaaaagggagaaaagggattccgtggcgttaag
ggggaaaagggggagccaggccagcctggcctggatgggctggatgccccttgccaattg
ggacctgatggattacccatgcctggctgctggcaaaagtga
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