Chionomys nivalis (European snow vole): 130890628
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Entry
130890628 CDS
T11437
Symbol
Rims1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04517
IgSF CAM signaling
cnl04721
Synaptic vesicle cycle
cnl04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130890628 (Rims1)
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
130890628 (Rims1)
04721 Synaptic vesicle cycle
130890628 (Rims1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnl04131
]
130890628 (Rims1)
Membrane trafficking [BR:
cnl04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
130890628 (Rims1)
Small GTPases and associated proteins
Rab associated proteins
130890628 (Rims1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130890628
NCBI-ProteinID:
XP_057650767
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Position
19:complement(20611095..21065248)
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AA seq
1641 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAESQPPQPPLNIFRCVCVPRKPSSEEGGPERNWRLHQQFESYKEQVRK
IGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKV
VMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSR
SQTPLSTAAASSQDTASPGAHVDRSKGAEPSQQAVGPDQKQTSRSRSEPPRERKKAPGLS
EQNGKGGLKSERKRVPKSAVQPGEGTAEERERKERRETRRLEKGRSQDYPDRPEKREDGR
AAEDEKQRKEEEYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPHT
EAAAAPAEATAGKRAPAATRASPPESPRARAPAAQPPAEHGPLAPRPVPGPAEPPEPRVP
EPLRKQGRLDPGSAVLLRKAKREKAESMLRNDSLSSDQSESVRPSPPKPHRPKRGGKRRQ
MSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTW
QPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVV
GHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPL
ESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQAT
DLPPRGDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERM
LEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPHPSPFLPRR
HIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKATTLTVPEQQRTT
HHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHKSRH
LESQYSSEQDSELLMLPRAKRGRSAECLHTTSELQPSLGRAKSASTNCLRPDTSLHSPER
ERGRWSPSLDRRRPPSPRIQIQHASPENDRHSRKSERSSIPKQTRKCTASDADRVLPSCL
SRRGYAIPRAADQAVVRGKHPTRSRSSERSSVRALCSMHHLAPGGSAPPSPLLTRTHRQG
SPTRSPPADTSFSSRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRFKQTAGSGSS
QELDREQYSKYNMHKDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSER
PRGRISSFTPKMQGRRMGTSGRAIIKSTSVSGEMYTLEHNDGSQSDTAVGTVGAGGKKRR
SSLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTD
GSINSYSSEGNLIFPGVRVGPDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKG
QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFD
ESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTP
LTRRASQSSLESSSGPPCIRS
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagccgtggggccccgcggtcctcgcccacccacggtgcctccccctatgcaa
gaactgcccgacctgagccacctgaccgaggaagagaggaacataatcatggcagtgatg
gaccggcagaaggaagaggaggaaaaagaagaggccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcctgcaaaacaccaaggaatgctgaaagccagccccctcaacca
ccactgaacattttcagatgtgtctgtgttccccgaaagccaagcagcgaagagggaggc
ccagaaagaaactggagattgcatcaacagtttgaaagctataaagaacaagtgagaaaa
atcggagaggaagcacggcggtaccagggcgagcacaaagatgatgccccgacatgtgga
atctgtcataagaccaagttcgctgacggatgtggccatctttgctcctattgtcgcacc
aagttttgtgcacgctgtggaggccgtgtgtctctgcgctcgaacaatgaggacaaagtg
gttatgtgggtatgcaatttatgtcgaaagcagcaagagatcttaaccaaatctggagca
tggttctttggaagtggccctcagcagcccagtcaggacgggactctgagtgacacagct
acaggtgctggatctgaggtgccgagagaaaagaaagcgagactccaagagcgatcaagg
tctcagacacctttgagtacggcagctgcctcgtcccaggacactgcctcccctggtgca
catgtggacaggagtaaaggggcggagccctcacagcaagccgtgggacctgaccagaag
cagacgtcaaggtctagaagtgagccaccaagggaaaggaagaaggctccagggctttcg
gagcagaatggcaagggaggcctgaagagcgagcgcaaacgcgtgcctaagtccgcggtg
cagcctggggaggggaccgcggaagagcgggagcggaaggaaaggcgggaaacccgcagg
ctggagaaaggacgctcccaggactacccggaccggccagagaaacgagaggatggcagg
gcggcggaggacgagaagcagaggaaagaggaggagtaccaaaccaggtaccgcagcgac
ccgaacctggcgcgctaccccgtgaagccgcctcccgaggagcagcagatgcgcatgcac
gcccgggtgtcccgcgcgaggcacgagcggcgccacagcgacgtggcactcccgcacacc
gaggctgcagccgcgccggccgaggccacggcgggcaagcgcgcgccagccgccaccagg
gcctctccgcccgagtccccccgcgcgcgcgcgcctgccgcccagcctcccgccgagcac
ggcccgctggctccacggccagtcccgggtcccgcagagccgcccgagccgcgcgtcccc
gagccgctccgtaagcagggccgcctggacccgggctcggccgtgctcctgcgcaaggcc
aagcgcgagaaggcagagagcatgctgcggaacgactcgctgagctccgaccagtccgag
tccgtgagaccgtccccgcccaagccgcaccggcccaagcggggaggcaaaaggcgacag
atgtcggtgagcagctcggaggaagagggcgtgtccacaccggagtacaccagctgcgag
gacgtggagctggagagcgagagcgtgagcgagaaaggtgacttggattattactggctg
gatcctgcgacgtggcacagccgggaaacgtcgcctattagttcgcatcctgtaacgtgg
cagccatcaaaagagggagaccgattaattggccgcgttattcttaacaaaagaacaacc
atgcccaaagaatcaggtgcattattgggtctaaaagtggttggaggaaaaatgacagac
ttaggacgtcttggtgctttcatcaccaaagtaaagaagggtagcctggcagatgtagtt
ggacacctaagagcaggggatgaagttctagagtggaatggtaaacccctgccgggagca
acaaacgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaaatt
attgtttcaaggcctattggtgacatcccccggatccctgagagttcccatcctcccctg
gaatccagttcaagttcctttgaatctcagaagatggaaaggccttccatttctgttatt
tctccaaccagccctggagctctgaaagatgccccacaagtcctaccagggcagctctct
gtaaagctgtggtatgataaagtgggacaccagctgattgtaaatgttctacaagcaacg
gatctaccccctagaggagatgggcgccccaggaatccctatgtaaaaatgtattttctt
ccagatagaagcgacaaaagtaaaaggaggaccaaaaccgtaaagaaaattcttgaacca
aaatggaaccaaacatttgtctactcgcatgtacatcgtagagatttccgggagcgaatg
ttggaaattactgtgtgggatcagccaagagtccaagaggaagagagtgaatttcttgga
gagatcctcatagagctggagacggcacttttggatgatgagccccattggtataaactc
cagacacatgatgaatcctcactacctctgcctcacccatcgccgtttctgccaaggcgg
catatccacggagagagctccagcaagaagctgcaaagatctcagcgaatcagtgatagt
gacatctcagattatgaggttgatgatggtattggagtagtgcctccagtgggttataga
tctagtgctagagagagtaaagccacaacattaacagtgccagagcagcaaagaaccact
catcaccgttcacgttcggtgtctcctcatcgcggcgatgatcagggaaggccgcgttca
cgtttaccaaatgtgccattacagaggagcttagatgaaattcatccaacacgaaggtca
cgttctccaaccagacaccatgatgcctcccgaagtccagtcgatcacaaatccagacat
ttggaaagtcagtattcatcggaacaagacagtgagcttctcatgctgcccagagcaaaa
cgaggacgaagtgctgaatgccttcacacgaccagcgagctgcagccctcccttggcagg
gctaagagtgctagtaccaactgcttgagaccagacactagtttgcattcaccagaacga
gaaaggggtagatggtccccctccctagataggaggcgacctcctagccccaggattcaa
atccagcatgcatctccggagaatgacaggcactccagaaagtctgaaagatctagcatc
cccaaacagactaggaaatgcacagcctctgatgcagacagggttctcccatcatgcctt
tctagaaggggatacgcaatcccaagagcagctgatcaagcagtcgttaggggaaagcat
cccactcgctcgcggtcgagcgagcgctctagtgtcagagccctgtgttctatgcaccac
cttgcccctggaggctcggcgccaccttctccgctcctgacaagaacgcaccgacaagga
agccctacgcggtctccgccagcagacacatccttcagcagtcgccggggaagacagctt
ccacaggtgccagttcgaagcggcagtatagaacaagcaagcttagtagtggaggagcga
acaagacagatgaaaatgaaagttcaccggtttaagcagacagcggggtctgggtctagt
caagaacttgatcgcgagcaatactccaagtataacatgcataaagatcagtacagaagc
tgtgataacgtctccgccaagtcatcagatagtgacgtcagtgatgtgtccgccatttcc
cgaaccagcagtgcctcacgcctcagcagcacaagctttatgtccgagcaatctgagcgc
cccaggggtaggatcagttcatttacccccaaaatgcaaggcagacggatggggacttca
ggaagagccatcatcaagagcaccagtgtaagtggagagatgtacacattggagcataat
gacggcagccagtccgacactgctgtggggaccgttggggcaggcggaaagaagcggaga
tccagcctgagtgccaaggtggtcgccatcgtctctcgaagaagcagaagcacatcgcag
ctcagccagacggagtcgggccacaagaagttaaaaagtaccatccagcggagtacggaa
acgggaatggcagccgaaatgcggaagatggtgagacagccaagccgagagtccacggac
ggcagcatcaacagttacagctccgaggggaacttaatattccctggagttcgagtagga
cccgacagtcagttcagtgatttccttgatggactggggccagctcagcttgttggccgc
caaaccctcgccacccctgccatgggtgatatccaaatcggaatggaggataaaaagggc
caattggaggttgaagttatcagagcccggagtcttacacaaaagcctggctccaagtct
acccctgcaccctatgtgaaagtctatcttttggaaaatggagcctgtattgccaaaaag
aagacaagaattgcacggaaaactcttgaccctttgtatcagcagtcccttgtttttgat
gaaagtccacagggtaaagttcttcaggtgatcgtctggggtgactacggaagaatggac
cacaaatgctttatgggtgtggctcaaatattgttggaagaacttgatctgtccagcatg
gtgattggatggtataagttgttccctccgtcatcactggtggatcccaccctcactccc
ctgacccgtcgggcttcccaatcatctctggagagttcatctgggcctccctgcatccga
tcatag
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