Chionomys nivalis (European snow vole): 130890634
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Entry
130890634 CDS
T11437
Symbol
Abcg1
Name
(RefSeq) ATP-binding cassette sub-family G member 1 isoform X1
KO
K05679
ATP-binding cassette, subfamily G (WHITE), member 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl02010
ABC transporters
cnl05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130890634 (Abcg1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
130890634 (Abcg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnl02000
]
130890634 (Abcg1)
Transporters [BR:
cnl02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG1, 4 subgroups
130890634 (Abcg1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
SMC_N
AAA_21
RsgA_GTPase
AAA_29
cobW
MMR_HSR1
AAA_28
AAA_13
AAA_16
AAA_22
Rad17
nSTAND1
AAA_23
AAA_25
nSTAND3
AAA_18
Cytidylate_kin
MeaB
AAA_30
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
130890634
NCBI-ProteinID:
XP_057650815
LinkDB
All DBs
Position
19:complement(57087850..57145774)
Genome browser
AA seq
670 aa
AA seq
DB search
MVSWDNSCRCPLSPLETKNASSYSAAMTEPKSVCVSVDEVVSSNVDDVETDLLNGHLKKV
DNNFTEAQRFSSLPRRAAVNIEFKDLSYSVPEGPWWRKKGYKTLLKGISGKFNSGELVAI
MGPSGAGKSTLMNILAGYRETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQE
AMMVSAHLKLQEKDEGRREMVKEILTALGLLPCANTRTGSLSGGQRKRLAIALELVNNPP
VMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQLYVLSQGQCV
YRGKVSNLVPYLRDLGLNCPTYHNPADFVMEVASGEYGDQNSRLVRAVREGMCDSDYKRD
LGGDTDVNPFLWHRPAEEDSASMEGCHSFSASCLTQFCILFKRTFLSIMRDSVLTHLRIT
SHIGIGLLIGLLYLGIGNEAKKVLSNSGFLFFSMLFLMFAALMPTVLTFPLEMSVFLREH
LNYWYSLKAYYLAKTMADVPFQIMFPVAYCSIVYWMTSQPSDAVRFVLFAALGTMTSLVA
QSLGLLIGAASTSLQVATFVGPVTAIPVLLFSGFFVSFDTIPAYLQWMSYISYVRYGFEG
VILSIYGLDREDLHCDIAETCHFQKSEAILRELDVENAKLYLDFIVLGIFFVSLRLIAYF
VLRYKIRAER
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggttagctgggacaattcctgcaggtgtcctctctctcctctggagacaaagaatgcc
agcagctactctgcagcgatgacggagcccaagtccgtgtgcgtgtcggtggacgaggtc
gtgtccagcaacgtggacgacgtcgagacagatctgctaaacggtcatctgaagaaagtg
gacaacaacttcacagaggcccagcgcttctcctccttgcctcggagggcggctgtcaac
attgaattcaaggacctttcctactctgttcccgagggaccctggtggagaaagaaagga
tacaagacccttttgaaagggatctctgggaaattcaacagtggagagctggtggccatc
atgggtccttctggagctgggaagtccacgctcatgaacattctggcaggatacagggag
accggcatgaagggggcagtcctcattaatggcatgccccgggacttgcgctgcttccgg
aaggtctcgtgttacatcatgcaggatgacatgctgctgcctcacctcaccgttcaggag
gccatgatggtgtctgcacatctgaagctgcaggagaaggatgaaggcagacgggagatg
gtcaaggagatcttgacggcgctgggcttgctgccctgtgccaatacacggacggggagc
ctatcaggaggccagcggaagcgcctggccatcgctctggagctggtcaataaccctcct
gtcatgttctttgatgagcccaccagtggcctggacagcgcctcctgcttccaggtggtg
tcactgatgaaaggcctggcccagggtggccgatccattgtctgcaccatccaccagccc
agcgccaagctctttgagctctttgaccagctttacgtcctgagtcaaggacagtgcgtg
taccggggaaaggtctcgaatctcgtgccgtatttgagggatttgggtctgaactgtcct
acctaccacaaccctgcagactttgtcatggaagtggcgtcaggcgagtatggcgaccag
aacagccgcctggtgagagctgtgcgggagggcatgtgtgactcggactataagagagat
ctcggaggcgacacggacgtgaacccatttctttggcaccggcctgctgaggaggactct
gcctccatggaaggctgtcacagcttctcggccagctgcctcacccaattctgcatcctc
ttcaagaggaccttcctcagcatcatgcgggactcggtcctgacacacctgcgaatcacc
tcacacatcgggatcggcctcctcattggcctgctgtacctggggatcgggaacgaagcc
aagaaggtcctgagcaactccggcttcctgttcttctccatgctcttcctcatgtttgct
gccctcatgcccactgttctgacctttcccctggagatgagtgtcttcctccgagagcac
ctgaactactggtacagcctgaaggcctactacctggccaagaccatggctgatgtcccc
ttccagatcatgtttcccgtggcctactgcagcatcgtgtactggatgacgtcacagccg
tcagacgccgtgcgctttgtgctgttcgctgcccttggcaccatgacctcactggtggcc
cagtctttaggcctgctgattggagctgcctccacatctctgcaggtcgccacgttcgtg
ggtcccgtgactgccatccctgtcctgctcttctcgggattcttcgtcagttttgacacg
atcccagcctacttgcagtggatgtcctatatctcctatgtcagatatggcttcgagggg
gtcatcctctccatctatggcttggaccgggaggatctgcactgcgacattgctgagacc
tgccacttccagaagtcagaggccatcctgcgggagctggatgtggagaacgccaaactg
tacctggacttcatcgtcttagggatcttcttcgtctccctgcggctcattgcctatttt
gtcctgagatacaaaatccgggccgagaggtaa
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