Clostridium neonatale: CNEO_0030
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Entry
CNEO_0030 CDS
T08280
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cnn
Clostridium neonatale
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnn03400
]
CNEO_0030 (addB)
Enzymes [BR:
cnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNEO_0030 (addB)
DNA repair and recombination proteins [BR:
cnn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CNEO_0030 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF6730
BK_channel_a
Motif
Other DBs
NCBI-ProteinID:
CAH0434779
LinkDB
All DBs
Position
CNEO:28992..32435
Genome browser
AA seq
1147 aa
AA seq
DB search
MSIRFIYGRAGTGKSRFCIDEIKKKLQLDENRKLILIVPDQYTFTTENNVLREIGEAAFL
KVQVLSFKKMASIVFEECGGRIKKIINESGKKMLIHKVLNENIDSLEYFKRISREQGFNE
IISEVISEFKKYNVDIDELKCIYQKIDNSELIIKIRELVSIFEAFNDKINEGYIDGEDEL
SLLYNKLQDCTLYNESEVWIDEFTTFTPQQLDIIKLLAKRCKRINITLTMESLDNIKSKE
FTDVFIPIHNTENRILKLMQENNIPYDKPINLNENEKTYRFFNSPQLEHIEKYFFSYPFK
EYGGVDNDRVVLYKANNIYDEIDRVARNIVNLVRIKNYRFKDISVVCRNIDDYEKIISVI
FKDYNIPYFLDKKIQLVSNPLIIVITSAFEIYLKNWSYESVFKYLKSGLIGIKNQYIDLL
ENFVLEYGIKGHKWNSEYLLTDPYFREMMNTDQNLIMISEIMDEVRKPLLNFHNKIRGKN
KVKDICKAIYEFLVELEAFEKIDKWIEDFDQNLQEDKVKEYSQVESIVINTLDQAVNVLG
EEKLEANEFFKILDSGFNNEEIGVIPVALDQVTIGDVARIKGRDVKALCIVGINDGVLPA
VKKDEGILSDKDREILNEYGIQLSSTTRKKIFEEQFLVYTALTISSEYLMLSYPMADFEG
KSLRPSIIISRIKKIFPDLNEESFINDLSINEDKLNRIVSPIPTFNDLILTVRRDFEKEE
IEEYWPEVYKWFANNEEYKEKMDNIFKGLEYSNIGDKVSKNKLKELYKNDNGKLMFSVSR
LEKYAGCPFSYFIMYGLKAKNRKVYEFAPPDLGSFVHEVLDTFTNRVKKDGILWSDLDND
KCKEIVTNIIDKRLEEESNSILNSSKRYKYLAKRFKRVIAKSVSVISEQIGKGEFEVFKT
EFKFGDYNTGEAVTLDLDNNERVYLQGRIDRIDTLDLDGNTYIRVIDYKTGAKKFDLNEV
YYGLQIQLLVYLDALIRNSKYILEKQAKPGAILYFKVDDPIIKSKKELTTEEIEVEVLEA
LKLKGLVLKDARVVRAMDKDIDGYSLVIPAAFKKDGDFKSNSDVVTEEEFDLLREYVNKK
MKELCEEMLSGDIKLQPSKDSNKTYCEYCDFESICQFDTDIKDNKYKIIIKRNKEEVLNN
IKNEVNK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaggtttatttatggaagagcaggaacaggtaaaagcagattttgtatagat
gaaattaaaaaaaaattgcaattagatgaaaacagaaaattgatattgatagtgccagat
caatatacctttaccacagaaaataatgtattaagagaaattggagaggcggctttttta
aaggttcaggtgctaagctttaaaaagatggctagcatagtctttgaagaatgtggtgga
cgaataaaaaagatcataaatgaatctggtaagaaaatgttgattcataaggtattaaat
gaaaatattgattcattagaatactttaagcgaatatcaagagaacaaggttttaatgaa
ataatatcagaagttatatctgaatttaagaaatataacgtagatattgatgaattaaaa
tgcatttatcagaaaattgataatagtgaattgattataaagataagagagctagtatca
atatttgaagcctttaacgataaaattaatgaagggtatattgatggagaagatgagtta
agtttattatataataagttacaagactgtacattatataacgaatctgaagtatggata
gatgaatttacaacttttacaccacagcagttagatataataaagttgttagctaagcga
tgtaaaagaattaatataacgttaaccatggaaagtttagataatataaaatcaaaagaa
ttcacagatgtatttatcccgatacacaatactgaaaatagaatattaaaattaatgcaa
gagaataatataccatacgataaacctattaatttaaatgaaaatgaaaaaacatataga
ttttttaattctcctcagttagagcatatagaaaaatactttttttcttatccatttaaa
gaatatggcggagttgataatgatagagtagttttatataaagcaaataatatatatgat
gaaatagatagagttgctagaaatatagtaaatttagttagaattaaaaactatagattt
aaagatatatcagttgtatgtagaaatatagatgactatgaaaagataatttctgttata
tttaaagattataatataccatactttttagataaaaaaattcaattagtcagtaatcca
ttaattatagttataacttcagcatttgaaatatacttaaagaattggtcttatgagagt
gtatttaaatatttaaaaagtggcttaataggtatcaaaaatcagtatattgatttatta
gagaattttgttttagaatacggaatcaagggacataagtggaatagtgaatatttatta
acagacccatattttagagaaatgatgaatacagatcaaaacttaataatgatatcagag
ataatggatgaagtaagaaaaccattattaaattttcataataaaattagaggaaaaaat
aaagtaaaagatatatgtaaagcaatatatgaatttttagtagaattagaggcatttgaa
aaaattgataagtggatagaagattttgatcagaatttacaagaagataaggttaaagaa
tatagtcaagtagaaagtatagttataaatacattagatcaagcagttaatgtattagga
gaagaaaaattagaagcaaatgagttctttaagatactagattctggcttcaataatgaa
gaaattggtgtaataccagtggcattagatcaagttacaataggagatgtagctagaata
aagggacgtgatgtaaaagcgctttgtatagttggtataaatgatggggtattacctgct
gtaaaaaaagatgagggaatattatctgataaagatagagagatactaaatgaatatgga
atacagctttcatcaactactagaaaaaagatatttgaagagcaatttttagtatatact
gcattgacaataagtagtgaatatcttatgctatcatatccaatggctgattttgaagga
aaatctttaaggccatctataattatatcaagaattaaaaagatatttcctgatctaaat
gaagaaagtttcattaatgatttatcaattaatgaagataagctaaatagaattgtttct
ccaattccaacatttaatgatttaatacttactgtaagaagagactttgaaaaagaagaa
atagaagaatattggccagaggtttataaatggttcgctaataatgaagaatacaaagaa
aagatggataatatttttaaaggacttgaatattctaatataggagataaggtgtctaaa
aacaaacttaaagagctttataaaaatgataatggaaaattaatgtttagtgtatcaagg
ttagaaaaatatgcaggatgtccattttcatattttataatgtatggcttaaaagctaag
aatagaaaagtatatgaattcgctcctccagatttaggatcatttgtacatgaagtatta
gacacatttactaatagagtaaaaaaagatggaatattgtggtcagatttggataatgat
aaatgcaaagaaatagtgacaaacataatagataagagattggaagaagagagtaattct
atattgaatagtagcaaaagatataagtatctagcaaagagatttaaaagagttatagct
aaatcagtatcggttatatcagaacaaataggtaagggagagtttgaagtattcaaaact
gaatttaaatttggagattacaatactggagaagctgtgacattagatcttgataataat
gagagagtatacttacaaggtagaattgacagaatagatactttagatttggatggcaat
acgtatataagagtaatagactataaaacaggggcaaaaaagtttgatttaaatgaagta
tactatgggttacagattcagctattagtttatttagatgcgcttataagaaattcaaaa
tatatattagaaaaacaagctaagccaggtgcaatattatatttcaaagttgatgatcca
ataataaagagtaaaaaagaattgacaacagaagaaatagaagtagaagtattagaagcg
ctaaaacttaaaggactagttttaaaagatgctagagtagttagagctatggataaagat
attgatggatattcattagtgattccagctgcatttaagaaagatggagattttaaatca
aatagtgacgttgttacagaagaagaatttgatttgttaagagaatatgtaaataaaaaa
atgaaagaattatgtgaagaaatgcttagtggagatataaagctacaaccatctaaagat
tcaaataaaacttactgtgaatattgtgactttgaatcaatttgtcaatttgatacagat
ataaaggataataaatataagataattataaaaagaaataaagaagaagttttaaacaat
ataaaaaatgaagtaaataaataa
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