Clostridium neonatale: CNEO_0172
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Entry
CNEO_0172 CDS
T08280
Name
(GenBank) Conserved hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cnn
Clostridium neonatale
Pathway
cnn03030
DNA replication
cnn03430
Mismatch repair
cnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNEO_0172
03430 Mismatch repair
CNEO_0172
03440 Homologous recombination
CNEO_0172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnn03032
]
CNEO_0172
03400 DNA repair and recombination proteins [BR:
cnn03400
]
CNEO_0172
Enzymes [BR:
cnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNEO_0172
DNA replication proteins [BR:
cnn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNEO_0172
DNA repair and recombination proteins [BR:
cnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNEO_0172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
AAA_16
NACHT
nSTAND3
RNA_helicase
Sigma54_activ_2
DUF87
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
CAH0434916
LinkDB
All DBs
Position
CNEO:180224..181156
Genome browser
AA seq
310 aa
AA seq
DB search
MRKIIGHQMIKGAINKRNINGSFSHANLIIGNDGIGKSIIAQYLASKILKGLDFINSVDI
VKYYPSSNTFGVDDVRKVIEEVNKKPYEGNRKVIIMYKCDKMTAQAQNALLKTIEEPPDG
VFLILLSDSLEQILETVQSRCQIYKLTPLSKDEILEYIDENYKSLNLEERQSAIAYSTGI
PGKVDRFIKDEKLKQLRDLCIELFDDILARNKKIVIKYQEAFNNLKDEKADLLDILLLYI
RDLLVLKELNKIERIINIDKVEKLELISRKISYKKLSNMLEYIKEARINFNSNSNYSMTI
SVLLMGFAEV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaaaataattgggcatcaaatgattaaaggtgcaataaataaaagaaatataaat
ggttcattttctcatgcaaatttaattataggcaatgatggaattggaaaaagtataata
gctcaatatttagctagtaaaatactaaagggattagatttcattaatagcgttgatatt
gtaaaatattatccttcttccaatacatttggtgtagatgatgttagaaaagtaattgaa
gaagtaaataaaaaaccttatgagggcaatagaaaggttattataatgtataagtgcgat
aaaatgactgcacaagctcagaatgcattattaaaaactatagaagagccaccagatggt
gtatttctaattttgttaagtgattcattagagcaaattttagaaactgtacaatcacga
tgccaaatatataaactaacgccattatcaaaagatgaaattttagagtatatagatgaa
aactataaaagcttgaatttagaagaaagacaatcagcgatagcctatagtacaggtatt
ccaggcaaagtagatagatttataaaagatgaaaaattaaaacaattaagagatttatgc
atagaattatttgatgatatattggctagaaataaaaaaatagttattaaatatcaagaa
gcatttaataacttgaaagatgagaaagctgatttattagatatattgcttctgtatatt
agggatttattagttttaaaagaattaaataaaatcgaaagaatcattaatattgataag
gtagaaaaattagaattaatatcaagaaagatatcttataaaaaattaagtaatatgtta
gaatacataaaagaggcaagaataaattttaatagtaattcaaactattcgatgactata
agtgtgctgcttatgggatttgcggaggtataa
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