Clostridium neonatale: CNEO_1225
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Entry
CNEO_1225 CDS
T08280
Name
(GenBank) Putative ABC transporter, ATPase/permease component
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cnn
Clostridium neonatale
Pathway
cnn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CNEO_1225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnn02000
]
CNEO_1225
Transporters [BR:
cnn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CNEO_1225
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_30
AAA_22
AAA_23
RsgA_GTPase
DUF2767
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CAH0435915
LinkDB
All DBs
Position
CNEO:1228523..1230448
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AA seq
641 aa
AA seq
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MASKGQRMPKGPGNKGPMVGPKSKNPSKTLKRLMSYVLNGYKMQFIIVIACIIISALVSV
AGNLFLGTLIDEYIIPLTKTQNPDFAPLLSMILKMAVIFYFGAISTYAYNRIMIFVSQGA
LKKIRDDMFAHMEKLSIPFFDTHPHGNLMSLYTNDTDTLRQMISQSIPQLLSAVITIVSV
FCSMLYLSIPLTCIVIVSVIVMTQVTKKIGGNSAKYFGKQQKDLGNINGYIEEMMEGQKV
VKVFCHEEETKKKFDELNEQLFDSAENANTFANILMPIMGNIGNLNYVIIVAVGAALAIN
GFNGFTLGALASFLQLTRQFTMPISQVAQQFNSIIMALAGAERIFEMLDEKQEVDDGYVT
LVNTKVNEDGNIEEVKGRTGTWAWKHPHEDGTITYTNVLGDVVFDGVDFGYNPEKIVLHD
VKLYAKPGQKIAFVGATGAGKTTITNLINRFYDIQDGKIRYDGININKIKKDDLRRSLGI
VLQDTHLFTGTVADNIRYGKLDATDEEVHAAAKLANADTFIKHLPKGYNTMLTGDGTNLS
QGQRQLIAIARAAIADPPVLILDEATSSIDTRTEAIVQDGMDKLMKGRTVFVIAHRLSTI
KNSDVIMVLEQGRIIERGNHEELIKEKGEYYQLYTGAFELS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaaggacaaagaatgccaaaagggccaggaaataaaggaccgatggtagga
cctaagagcaaaaatcctagtaaaacattaaaaagactaatgtcttatgtattaaatgga
tataaaatgcagtttataattgtaattgcatgtatcattattagtgctcttgtaagtgta
gctggaaatctatttttaggaactttaattgatgaatatataattcctcttactaaaact
caaaatcctgattttgcaccacttttaagtatgatactaaaaatggcagttatcttttat
tttggagctatttcaacttatgcatataatcgtataatgatttttgtatctcaaggtgca
ttaaagaaaataagagatgatatgtttgcacatatggaaaaactatcaatcccatttttt
gatacacatccacatggaaatttaatgagtctgtatacaaacgatacagatactttaaga
caaatgataagtcaaagtataccacagcttttatcagctgttataacaattgtaagtgta
ttttgctcaatgttatatttaagtattccattaacatgtatagtaatagtatctgtaata
gttatgactcaggttacaaagaagattggtggaaatagtgcaaagtattttggaaagcag
caaaaagatttaggtaacatcaatggatatattgaagaaatgatggaaggacaaaaagta
gtaaaagtattctgtcatgaagaagaaacaaagaagaagtttgatgaacttaatgagcaa
ctttttgatagtgctgaaaatgcaaatacatttgcgaatattttaatgcctatcatgggg
aatataggaaacttaaactatgttattatagtagcagttggtgctgcacttgctataaat
ggatttaatggctttacacttggagcgcttgcgtcatttttacaattaacaagacaattt
acaatgccaatatctcaagtagcacaacagtttaattctatcatcatggcacttgcaggt
gctgaacgtatctttgaaatgttagatgaaaaacaagaagttgatgatggttatgtaaca
ttagttaatactaaagttaatgaagatggaaatatagaagaagttaaaggacgtacagga
acatgggcttggaagcatccacatgaagatggtacgattacttatactaatgttcttggt
gatgttgtttttgatggtgtagattttgggtataatccagaaaaaatagttttacatgat
gtgaaattatatgcaaaaccaggtcagaagattgcttttgtaggagcaacaggtgcagga
aaaacaactattacaaatttaatcaaccgtttctatgacattcaagatggtaagattaga
tatgatggtataaatatcaataagattaaaaaagatgatttaagaaggtcacttggtata
gttcttcaagatactcatttattcacaggtacagttgcagacaacataagatatggtaaa
ctagatgctactgatgaagaagtacatgcagcagcaaagcttgctaatgcagataccttt
ataaaacatcttccaaagggttataatacaatgcttacaggagatggaacaaacctatca
caaggtcaaagacaattgattgcaattgcaagagctgctatagcagatccaccagtactt
atacttgatgaagccacttcaagtatagatacaagaacagaagctatagttcaagatggt
atggataagcttatgaagggaagaactgtatttgtaattgctcatagactttcaacaatt
aagaattcagatgttattatggttcttgaacaaggaagaataatagagcgtggaaatcat
gaagaattaataaaagaaaaaggtgagtattatcaattatatacaggagcttttgaatta
tcataa
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