Clostridium neonatale: CNEO_1436
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Entry
CNEO_1436 CDS
T08280
Name
(GenBank) Putative ribonuclease H-like domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cnn
Clostridium neonatale
Pathway
cnn03030
DNA replication
cnn03430
Mismatch repair
cnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNEO_1436
03430 Mismatch repair
CNEO_1436
03440 Homologous recombination
CNEO_1436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnn03032
]
CNEO_1436
03400 DNA repair and recombination proteins [BR:
cnn03400
]
CNEO_1436
Enzymes [BR:
cnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNEO_1436
DNA replication proteins [BR:
cnn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNEO_1436
DNA repair and recombination proteins [BR:
cnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNEO_1436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
RNase_H_2
DNA_pol_A_exo1
PTX3_N
PTCB-BRCT
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
CAH0436111
LinkDB
All DBs
Position
CNEO:1441811..1442740
Genome browser
AA seq
309 aa
AA seq
DB search
MNFIAIDFETANEKRNSPCSIGIVEVKNGNVVEKVHHLIKPKEMRFMPINIGIHGIRPKM
VENELEFDEVWNKIKHYFDDNLVIAHNASFDISVLRKTLELYEIEMPKFNYICTMKLSRN
FYRNIDNAKLNTVNKFLGYEFIHHDALYDALACSNILLNISDELECKDINEICKLLGVTL
GNVDNEGYKPSSSRGRIFRFSNRQPAKNDIREQLDYDAFKDEVVVFTGGLASMARDEAMR
FVRRLGGTCGSSVTKKTTILVTNMQNIDDLSRDEMSNKLRKAVDLRVRGQNILFLSEEEF
LNRFKIHQE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattttatagctatagattttgagacagcaaatgaaaaaagaaatagtccatgttca
ataggtattgttgaagttaaaaatggtaatgtagtagaaaaggtacatcatttaataaag
cctaaagaaatgagatttatgccaattaatatcggtattcatgggatacgtcctaagatg
gttgaaaatgaattggaatttgatgaagtttggaataagataaagcattactttgatgat
aatttagtaatagcgcataatgcttcatttgatatatctgtacttagaaagacactagag
ctttatgaaatagaaatgcctaaatttaattacatatgtacaatgaaactttcaaggaac
ttttatagaaatattgataatgcaaaattaaatacagtaaataaatttttgggatatgag
ttcatacaccatgatgctctttatgatgctcttgcttgcagtaatatacttcttaatata
tctgatgagttagaatgtaaagatattaatgaaatatgtaagcttttaggtgtgacatta
ggaaacgttgacaatgaaggatataagccatcttcatctagaggaagaatattcagattt
tctaatagacagcctgctaaaaatgacataagagaacaacttgattatgatgcatttaaa
gatgaagttgttgtatttacaggaggacttgcatccatggcaagagatgaagccatgaga
tttgtaagaaggcttggaggaacttgtggaagttctgtaactaagaagacaacaattctt
gttactaacatgcaaaatatagatgacttaagcagagatgaaatgagtaataaacttaga
aaagctgtggatttaagagtcagggggcaaaatatactttttttaagtgaagaagagttt
ttaaatagatttaaaattcatcaggaataa
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