Clostridium neonatale: CNEO_2066
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Entry
CNEO_2066 CDS
T08280
Symbol
spoVD
Name
(GenBank) Stage V sporulation-specific penicillin-binding protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cnn
Clostridium neonatale
Pathway
cnn00550
Peptidoglycan biosynthesis
cnn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CNEO_2066 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cnn01011
]
CNEO_2066 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cnn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CNEO_2066 (spoVD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
YonK
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
CAH0436707
LinkDB
All DBs
Position
CNEO:2014040..2016292
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AA seq
750 aa
AA seq
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MKRNNYKDRAKMRQRMSIVILGLTVVFAILTTRLTYIMTVKRQEYAARAEEQWTSEVKID
AIRGKILDRNGKELAVSANVYRVDFDLNSIRSYLKRDLTEDRIRELNSIGITVSKGKTEL
TMDDIAPAIATALDLDVNKVKEKLETKLPSGAQAGSATLIRRIEKEQADKVKALNISGVL
VSPDTKRYYPNNNFLAHVLGSTNIDGTGLTGVELEYNSYLSGVPGMKITELDKNNNDLPY
TISQFTSPVNGKDVTLTIDENIQYFAEKAAKQAYEDNMAKAVSVLVMDPHTGEILAMVNK
PDFDPNEPYEGYENFDGANKSEQIQKMWRNRLVNDTFEPGSIFKVITAITALEEGLVNEN
STFFCGGSYSVGGIHPKCWRTQGHGTQTFPEIIQNSCNVAFIQLGQLIGKEKLSEYINKF
GFGKTSGVDLPGEASGIVKKVDNISEADLATISFGQTNTVNSVQYMAALNAIANGGTLIQ
PHVMKEVTHEDDNGVKIVDEAFSPKKTTVASEETTKALRTYLERVVMYGSGNSTFIEGYH
IGGKTGTAQKVENGRYQDGKYISSFVGMAPVDDPKVTIMITVDEPSNGAYYAGQVAAPYA
KNLFMDIFNYLDNKFSDENTSQISRDVVIPDVRNLKVDEAKKVLKEAKLDFTIDGSGEKV
VDMSPYPGYSVKEGSKINLYTGSDATYNNNVAMPDVRGYSKENAEALLSGLGITSSFEGE
GTIADQSISPGEIVSKGTSVKFTLNSDYED
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaagaaataattataaagatagagcaaaaatgaggcaaagaatgagcatcgtaatc
ttaggattaacagttgtttttgctatcttaactactcgattaacttatataatgactgtt
aaaagacaggaatatgctgcaagagcggaagaacaatggactagtgaagtaaaaatagat
gctataagaggaaaaatattagatagaaatggaaaagaacttgctgtatctgccaatgta
tatagagttgactttgatttaaattcaataagatcatatttaaaacgtgatcttacagaa
gatagaattagagaacttaacagtataggtataactgtctctaaagggaagacagaactt
acaatggatgatattgcaccagctattgccactgctctagacttagatgttaataaggta
aaagaaaaattagaaactaagcttccaagtggtgctcaagcaggatctgcaactcttata
agaagaattgaaaaagaacaggctgataaagttaaagcgcttaacattagtggcgtattg
gtatctccagatacaaaaagatattatcctaataataatttcttagcgcatgtacttgga
agtactaatattgatggtacgggtcttacaggtgtagaactagagtataactcgtattta
tcaggtgttccaggaatgaaaattaccgagcttgataaaaacaataatgatttaccatat
acaatatctcaatttacttctccggtaaatggtaaggatgtaactctaacaatagatgaa
aatatacagtatttcgctgagaaagcagccaaacaagcttatgaagataatatggcaaaa
gcagtttcagtattagtaatggatcctcatactggtgagattcttgcaatggttaataaa
cctgattttgatcctaatgaaccatatgaaggatatgagaattttgatggagctaataaa
agtgagcaaatacaaaaaatgtggagaaatagacttgtaaatgatacatttgaacctggt
tctattttcaaggtaattactgcaatcactgctcttgaagaggggcttgttaatgaaaat
agtacatttttctgtggaggttcttattcagtaggaggtatacatccgaaatgttggagg
actcagggacatgggactcaaacttttccagagattatacagaactcatgtaatgtagca
tttattcaattaggacagcttattggaaaagaaaaattaagtgaatatataaataaattt
ggatttggaaaaactagtggagtagatttgccgggagaagcctctggtattgtaaagaaa
gttgataatatttcagaagctgatttagctaccatatcttttggacagactaatacggta
aattcagtacaatatatggctgcattaaatgctattgcaaatggtggaacattaatacag
cctcatgtaatgaaagaagtaactcatgaggatgacaatggagtgaaaatagtagatgaa
gcatttagccctaaaaaaactacagttgcgagtgaagaaactactaaagctcttagaaca
tatcttgaaagagttgttatgtatggatctggtaatagtacatttatagaaggatatcat
attggaggcaagactggtactgcacaaaaagttgagaatggaagatatcaagatggaaaa
tatatatcatcttttgttgggatggcaccagtagatgatccaaaggtaactataatgatt
acagtagatgaaccaagtaatggtgcttattacgcaggtcaagttgctgcaccatatgca
aaaaatctatttatggatatatttaattatttagataataaattctcagatgaaaatacg
agtcaaatatctagagatgtggtaatcccagatgttagaaatcttaaggttgacgaagct
aaaaaagtcttaaaagaagctaaattagattttactattgatggcagtggtgaaaaagtt
gtagacatgagtccatacccaggatattctgtaaaagaaggatcaaaaataaatctttac
acaggaagtgacgcgacttataataataatgttgcaatgcctgatgttagaggatacagt
aaagaaaatgcagaagctctactaagtggcttaggtataacttcttcttttgaaggagaa
ggaactatagctgatcaaagtatttcgccaggagaaatagtaagtaagggcacaagtgtt
aaatttacattgaactcagattatgaagattaa
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