Clostridium neonatale: CNEO_2086
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Entry
CNEO_2086 CDS
T08280
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase (DAP epimerase)
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cnn
Clostridium neonatale
Pathway
cnn00300
Lysine biosynthesis
cnn00470
D-Amino acid metabolism
cnn01100
Metabolic pathways
cnn01110
Biosynthesis of secondary metabolites
cnn01120
Microbial metabolism in diverse environments
cnn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CNEO_2086 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CNEO_2086 (dapF)
Enzymes [BR:
cnn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CNEO_2086 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
CAH0436727
LinkDB
All DBs
Position
CNEO:2033176..2034003
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AA seq
275 aa
AA seq
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MKFYKMQGAGNDFIFVEDFNFEIKDECNLAKQLCNRHFGIGADGLVIVRKSDVSEAKMII
INSDGSRANMCGNAIRCFGKYVYEKNIVDKTKFSVETGDGVKEIEIILEDNKTKYVRVYM
GEGSYNGADIPLNNLENLIDKEVEVDGKVYKMTTVLVGVPHTIIFEENENYDVEVDGSKI
EKYKLFKEGTNVNFVKVIDDTHIRVNTWERGAGATLACGTGCSASVLVSKKLGLVDKNKE
VFVKAPGGELIIEVLDEGLFMKGPAEFVFSGETSK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttataaaatgcaaggggcaggaaatgattttatatttgtagaagattttaat
tttgaaataaaagatgaatgtaatttagcaaaacagctttgtaatagacattttggaata
ggagcggatggactagttatagttagaaaatcagatgtttctgaagctaaaatgataata
ataaatagtgacggctcaagagcaaatatgtgtggcaatgcaataagatgctttggaaag
tatgtttatgaaaaaaacatagtagataaaacaaaattttcagttgaaactggagatgga
gtaaaggaaatagaaattatattagaagataataaaacaaaatatgtaagagtttatatg
ggcgaagggtcttataatggtgcagatattccattaaataatttagaaaacttaatagat
aaagaagttgaagtggatggtaaagtatataagatgacaactgtacttgttggagtacct
catacaataatatttgaagaaaatgaaaattatgatgtagaagtagatggttctaaaatt
gaaaaatataagttatttaaagaaggtacaaatgttaattttgtgaaagttatagatgat
actcatattagagtaaacacatgggagagaggtgctggagcaaccttagcctgtggaaca
ggatgctctgcatctgtacttgtttctaaaaaattaggtttagtagataagaataaagaa
gtttttgttaaagcgccaggtggagagcttataatagaggtcttagatgaagggctattc
atgaaaggacctgctgaatttgttttttctggagagacatcaaaatag
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