Clostridium neonatale: CNEO_2390
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Entry
CNEO_2390 CDS
T08280
Name
(GenBank) Putative RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
cnn
Clostridium neonatale
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnn03021
]
CNEO_2390
Transcription machinery [BR:
cnn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CNEO_2390
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
SoDot-IcmSS
Motif
Other DBs
NCBI-ProteinID:
CAH0437014
LinkDB
All DBs
Position
CNEO:2325523..2326188
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AA seq
221 aa
AA seq
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MLECVLKDLNMGEYSDIDSLIEKHMPFIIKSISDTTGRYVSCENDEEISIGLLAFNEAIE
RYDNDKGHFLSFAKLVISSRIKNYLKSENKHQHSSFEDLVEKGLDIKDEYIEQEEENELL
VDEITRFKEEISSFGFSLEDLVEEAPKQQATRINAINLSEQISDDEEFLTFMYEKKRLPI
KRIVLKYSVTEKVIKRSKKFIISVVIIIDKNFRMLRNWIRK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaatgtgtcttaaaagatttaaatatgggtgaatattctgatattgattctctt
attgaaaaacatatgccttttataataaagagtatttcggatactacaggaagatatgtt
tcgtgtgagaatgatgaggaaattagtattggattgcttgcatttaatgaagctatagag
agatatgacaatgataaaggacattttttatcctttgcaaaactcgttatttcaagtaga
ataaaaaactacttaaaaagcgaaaataaacatcaacattcttcttttgaagatttagtt
gaaaaaggtttagatattaaggacgagtatattgaacaagaggaagaaaatgaattgtta
gttgacgagataacaagatttaaagaagaaataagctcctttggttttagtttggaagat
ttagttgaagaagcacctaaacaacaagctacaagaattaatgcaatcaatttatcagag
cagataagtgatgatgaagaatttcttactttcatgtatgaaaaaaagagacttccaata
aaaagaatagtattaaaatattctgttacggaaaaagtaataaaaagaagtaaaaaattt
attatttctgttgtgataataattgataagaatttcagaatgctgagaaactggataagg
aagtag
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