Clostridium neonatale: CNEO_2500
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Entry
CNEO_2500 CDS
T08280
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
cnn
Clostridium neonatale
Pathway
cnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CNEO_2500 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnn03400
]
CNEO_2500 (mutS)
DNA repair and recombination proteins [BR:
cnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CNEO_2500 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
AAA_27
DASH_Ask1
AAA_29
AAA_14
Motif
Other DBs
NCBI-ProteinID:
CAH0437121
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Position
CNEO:complement(2448761..2451589)
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AA seq
942 aa
AA seq
DB search
MALTPMMVEYMKTKEQYSDCILFYRLGDFYEMFFEDAITVSRELELVLTGKNCGLEERAP
MCGIPHHAAAAYIPRLVNKGYKVAICEQLEDPKQAKGIVKRGVVKIITPGTFVDNNSNLE
NDNTYLMAIHEDGEIIGIATSDISTGEFKTTSFSYSMASLLDEIAKLSPKEILLDENTSE
DIINEIKGVCSALITKKNFNTFVVSKEELIAQFSDLEAGALENLREITSRVLLKYIYETQ
MMSLSNINLLEQYEIVNYMVIDSNSRRNLELTESIREKTKKGSLLWVLDKSATTMGGRTI
RRYIDEPLIVKSQIEKRLSGVEELYNSISFNEDLRRALKEIYDIERIVGKISNKNVNAKD
MLSLKASLEKIPELKELLKYAKSDLLMEYYENLDELSDVRTLLEDSIKEDPSLTIKEGNI
IKDKYNELVDELRDVKLHGKEKIAALENEEREFTGIKSLKVGYNKVFGYYIEISKANFDS
IPEGRYIRKQTLANAERYITEDLKNLENKILGSEEKLVNLEYDLFVEVRDKVEKEIGRLK
KAARIISNLDAVSTLALVALENDYVKPKINEEGTIEIKDGRHPVVEKVIGNGEFVSNSTT
CNQTDKELLLITGPNMAGKSTYMRQVALITLMAQIGSFVPATEADISICDKIFTRIGASD
DLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYITKNKDL
RCKTLFATHYHELVKLEGILPGVKNYSVAVKKTNDSVVFLRKIIEGGADESYGIEVAKLA
GLPDEVINRAREILSDLEGENKFDIENVSSFSEIKENKESFKEAAIDVNESRVIVEEKVS
SDASVNVYENKVDIDESNNLKEIEKQKQIIEELQNEIKQLKEEQHSKKHKKSTNDSMQIG
FDSLEKDSFIKEISKIDILGLNPMEAMNRLYKLVSDSKKLSN
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggctttaacgccaatgatggtagaatacatgaagacaaaggagcagtatagtgactgt
atcctattttatagattaggtgacttttatgaaatgttcttcgaagatgctataacagta
tcaagagaacttgaacttgttttaacagggaaaaattgtggacttgaagaaagagctcca
atgtgtggcataccacatcatgctgcagctgcatatataccaagacttgttaataaggga
tataaggtagctatctgtgaacagcttgaagacccaaagcaagctaagggaattgtaaaa
cgtggagtagttaaaatcataactccaggaacatttgtagataataattctaatcttgaa
aatgataatacatatttaatggctatacatgaagatggtgaaataattggaattgctaca
tctgatataagtacaggagaatttaagacaacatctttttcatattctatggcaagtctt
ttagatgaaatagcaaaactttcaccaaaagaaattttattagatgaaaatacaagtgag
gatattataaacgaaataaaaggtgtatgttctgcacttataactaaaaagaactttaat
acatttgtagtatctaaggaagaacttatagctcaattttcagatcttgaagccggtgct
cttgaaaacttacgtgaaattacaagtagagtgcttcttaaatatatatatgaaactcaa
atgatgagtttaagcaatatcaatttacttgaacaatatgaaatagtaaattacatggtt
attgacagtaattcaagaagaaacttagaacttactgaaagcataagagaaaaaactaaa
aaaggatctcttttatgggttttagataaaagtgcaacaactatggggggaagaacaata
agaagatatattgatgaacctcttattgtgaaatcccaaatagaaaaaagacttagtggt
gtagaagaactatataattcaataagttttaatgaagatttaagaagagcacttaaagaa
atttatgatattgaaagaattgttggaaaaatatcaaataaaaatgtaaatgcaaaagat
atgctgagcttaaaagcatctcttgaaaaaataccagagcttaaagaacttttaaaatac
gcaaaaagtgatcttttaatggagtattatgaaaacttagatgaactttctgatgtaaga
actcttttagaagattcaataaaagaagatccatcacttacaataaaagaaggaaacatt
ataaaggataaatataatgaacttgtagatgagcttcgtgatgtgaagcttcatggaaaa
gaaaaaattgcagcgcttgaaaatgaagaacgtgaatttacaggaattaaatcattaaag
gttggatataacaaagtatttggttactatattgaaataagcaaagctaactttgatagt
attccagaaggaagatatataagaaagcagacactagcaaatgctgaaagatatataact
gaagatcttaaaaatttagaaaataagattttaggttctgaagaaaagcttgttaattta
gaatatgacttattcgttgaagtaagagataaagttgaaaaagaaataggtagattaaaa
aaggcagcaagaataatttctaacttagatgcggtctcaactttagctttagttgctctt
gaaaatgattatgttaaacctaagataaacgaagaaggaactatagaaataaaagatgga
cgtcatcctgttgttgaaaaagtaataggcaacggtgaatttgtatctaatagcacaaca
tgtaatcaaacagataaagaactattacttattacaggacctaacatggcaggtaaatct
acttatatgagacaggttgcacttattactcttatggcgcaaattggatcttttgtacca
gcaacagaagcagatatttcaatatgtgataagatatttacaagaattggagcatcagat
gatctagctggcggtaaatctacttttatggttgaaatgtgggaagtttctaatattctt
aaaaatgctacatctaaaagtttagttcttcttgatgaagttggacgtggtacttcaact
tatgatggactttcaattgcatggtctgttattgaatatataactaaaaataaagattta
agatgtaaaactttatttgcaacacattatcatgaacttgttaaacttgaaggaatatta
cctggagttaaaaattactctgttgctgttaagaagacaaatgacagcgttgttttctta
agaaagataatcgaaggcggtgcagatgaatcttatggtatagaagttgcaaagcttgca
ggtcttccagatgaagttataaatcgtgctcgtgaaattttatctgatcttgaaggtgaa
aataagtttgatattgaaaatgtatcaagtttttcagaaataaaagaaaataaggaatca
tttaaagaagcagctatagatgtaaatgaaagcagagttatagtcgaagaaaaagtaagt
agtgatgcaagtgttaatgtttatgagaataaagtagatatagatgaaagtaataattta
aaagaaatagaaaagcaaaaacaaattattgaagaattgcaaaatgaaataaaacagctt
aaagaagaacaacatagtaaaaagcataaaaagagtactaatgattctatgcaaatagga
tttgattcactagaaaaagattcatttataaaagaaataagcaaaattgatattttaggc
ttaaatcctatggaagctatgaatagactttataagctggttagcgattctaaaaaatta
agcaactag
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