Clostridium neonatale: CNEO_2507
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Entry
CNEO_2507 CDS
T08280
Symbol
appD
Name
(GenBank) Oligopeptide ABC transporter, ATPase component
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
cnn
Clostridium neonatale
Pathway
cnn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNEO_2507 (appD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnn02000
]
CNEO_2507 (appD)
Transporters [BR:
cnn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CNEO_2507 (appD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
tRNA_lig_kinase
RsgA_GTPase
NB-ARC
KH_PARP14_4
AAA_29
Mg_chelatase
NPHP3_N
RNA_helicase
DKNYY
Motif
Other DBs
NCBI-ProteinID:
CAH0437126
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All DBs
Position
CNEO:complement(2455914..2456906)
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AA seq
330 aa
AA seq
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MDEKKLSIRNLSVSFLQGDSKVTAVDDVSFDMNNGKILGMIGESGCGKSTLGLSIMNLLP
EKTSSIDKGEIFFNGKDLSKLKENELQKIRGNNISMIFQEPMTSLNPLFKIGRQIGEPLK
IHKNIKGQELKDKVIELLKDVHIPNPEKIYNAYPHNLSGGMRQRVMIAMALSCEPEIIIA
DEPTTALDVTIQSQILYLLKQLNEKRNTSILFITHDLSVVAEICDEVVVLYGGKIVEKAD
VNEIFDNAKHPYTIGLLESQPHMGQVGKSLPSINGMVPKLDEMPKGCRFSTRCSKKFCSK
CTDLEPPLFIINEKHMAACWLYEKEVDKSE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaaagctttctattagaaatttaagtgtaagctttcttcagggtgatagt
aaggttactgcagttgatgatgtcagctttgatatgaataatggaaaaatccttggcatg
atcggggaatcaggatgtggtaagagtactttaggattatcaataatgaaccttcttcca
gagaagacaagcagtattgataaaggtgagatcttctttaatggaaaagacttatcaaag
cttaaggaaaatgagcttcaaaaaataagaggtaacaatatctctatgatatttcaggag
ccaatgacttcccttaatccgttattcaagattggaagacagattggagaaccgttaaag
atacataaaaatattaagggacaggagcttaaagataaagtcattgagcttcttaaggat
gttcacatacctaatcctgaaaaaatatataatgcttatccacataatttaagtggagga
atgcgtcaacgtgtcatgattgcaatggctttaagttgtgagcctgaaataataattgca
gatgaaccaacaactgcacttgatgttacaatacaatctcagattttatatcttcttaaa
cagcttaatgaaaagaggaatacatcaatcctttttattactcatgatttatctgtagtt
gcagaaatatgtgatgaagttgtagttttatacggaggaaagattgttgaaaaagcagat
gttaatgagatttttgataatgcaaaacatccgtatacaatcggtcttttagaatcacag
cctcatatgggacaagttggaaagtctcttccaagtataaatggtatggtgcctaaacta
gatgaaatgccaaagggctgcagatttagcacaaggtgtagtaaaaagttctgttcaaaa
tgtacagatttagagccacctttatttataataaatgaaaaacacatggctgcatgctgg
ctttatgaaaaggaggtggataaaagtgagtga
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