Clostridium neonatale: CNEO_2510
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Entry
CNEO_2510 CDS
T08280
Symbol
appA
Name
(GenBank) Oligopeptide ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cnn
Clostridium neonatale
Pathway
cnn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNEO_2510 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnn02000
]
CNEO_2510 (appA)
Transporters [BR:
cnn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CNEO_2510 (appA)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CAH0437129
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Position
CNEO:complement(2459146..2460825)
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AA seq
559 aa
AA seq
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MLYKKKKILSGLSSIALSLLLFTGCGSTSAEIPSDAGSASNESQSDSSVLRYAVASSPKG
LFSPLLSNTTYDNNVNNLVYSPLILLDENNEYKPGLAEKYEFSDDNLTITFHLRKGIKWH
DGEPFTADDVLFTFTSMADPNYTGSRFNEISKIVGAQDYHDGKADSISGIKVIDENTISF
TYTEVFAPSLSNFSQRGIIPKHIWSKVNIADWENSSELLNKPIGTGPYKFVEFKPDQYVE
LERNEDYFGGAPKIEKFIFKVTNTETELSELAKGDLDIVTLTSTKEEDFKMLKDAGIKIE
EKPSANYQFLTMNSNKEFFKDKRVRQAITYAINREGMAKSLIGEHGQVVNAPISLAGWAY
PESGLNTYDYSVDKAKSLLNEAGWTEKDGVLQKDGVKFEVDMLVPTGNKVREQSAPIIQQ
NLKDVGITVNISTMDIASAMAKTHGEGDYDMGLFGFTLEVDPGDADRYWASSIANGSQFN
FSNFINTQSDELLDKATKTIDKNERKKIYAEWGKLINEEAPYVFLYSQNDIRAYNPKLEG
YTYSAYSVFPGIENWTISK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgctttataaaaagaaaaaaattttatcagggctatcttcaatagcgttgagtttatta
ctatttacgggatgcggaagtacatctgcagaaataccaagtgatgcaggctcagcatca
aatgaatcgcaaagtgattcatctgtattaagatatgcagtagcttcttcacctaaaggt
cttttcagtcctttattatcaaataccacatacgataacaatgtaaataacttagtttat
tcaccacttatattattggatgaaaacaatgaatacaagccaggattggcagagaagtat
gagttctctgatgataatttaactattacctttcatttgagaaaaggtattaagtggcat
gatggagagccttttacagctgatgatgtgttatttacatttacaagcatggctgatcca
aactatacaggttcaagattcaatgaaatatcaaagattgttggggcacaggattatcat
gatggaaaagctgattccataagtggaataaaagtaatagatgaaaatactataagcttt
acttatacagaagtgtttgcaccatcattatctaatttttcacagcgtggaattattcca
aagcatatatggagcaaggtgaacattgctgattgggaaaattcaagtgaactacttaac
aagccaataggtacaggcccatataagtttgttgagttcaagccagatcaatatgttgaa
cttgaaagaaatgaagattattttggaggagctccaaagattgaaaaattcatatttaaa
gttacaaatacagaaacagaattatcagaattagctaagggtgatcttgatattgtaaca
cttacaagcacaaaagaagaagattttaagatgcttaaagatgccggaataaaaattgaa
gagaagccaagtgcaaattatcagtttttgacaatgaacagcaacaaagaattcttcaag
gataagagggttcgtcaggcaattacttatgcaattaacagagagggaatggcaaaaagc
cttataggtgaacatggacaagttgttaatgcaccaatatcattagcaggatgggcttat
cctgaatcaggacttaatacttatgattatagcgttgataaggcaaaatcattgttaaat
gaagcaggatggactgaaaaggatggtgtacttcaaaaagatggcgttaaatttgaagta
gatatgctagttccaactggaaacaaagttcgtgagcagagtgcacctataatacagcag
aacttaaaggatgttggaataacagttaatataagcacaatggatattgcatctgcaatg
gcaaaaacacatggcgaaggtgactatgacatgggactatttggattcacacttgaagta
gatccaggtgatgctgaccgttattgggcttcatcaattgcaaatggttcacagttcaac
ttctcgaactttataaatacacaaagtgatgaattattagacaaagctacaaagacaatt
gacaaaaatgaacgtaagaaaatctatgcagaatggggaaaattaattaatgaagaagca
ccatatgtatttttgtattcacaaaatgatattcgtgcatataatcctaaattagaagga
tatacttattcagcatattcagtatttcctggaatagagaattggacaatatcaaagtaa
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