Clostridium neonatale: CNEO_3312
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Entry
CNEO_3312 CDS
T08280
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cnn
Clostridium neonatale
Pathway
cnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNEO_3312 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnn03019
]
CNEO_3312 (pnp)
03016 Transfer RNA biogenesis [BR:
cnn03016
]
CNEO_3312 (pnp)
Enzymes [BR:
cnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CNEO_3312 (pnp)
Messenger RNA biogenesis [BR:
cnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CNEO_3312 (pnp)
Transfer RNA biogenesis [BR:
cnn03016
]
Prokaryotic type
tRNA degradation factors
CNEO_3312 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
RNase_PH_C
EXOSC1
DUF1108
Motif
Other DBs
NCBI-ProteinID:
CAH0437881
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All DBs
Position
CNEO:complement(3276640..3278745)
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AA seq
701 aa
AA seq
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MNNVLTTEIAGKELKVEFGKVGMLSNAATFTSYGDTVILTNVNASEEPREGIDFFPLSVE
YEERLYAVGKIPGGFIKREGKPSEKSILNGRAVDRTIRPLFPKGYRNDVQVVCTVVSVEK
DVLPEILAINAASLALCLSSIPYTIPAAAVQVGLINGEFITNPDSEGRKESTLHLTVCAT
KEKVMMIEAGGDEIPEDIMIAAIKYGFDECQKIISFQEEAMAKFGKKKDEPEFYKVDEEV
EKDIKEFAQDMVYEAMHITDKDERNAAIDAINEKVQEEFGEKYAEKLADIKEVLYTMQKK
VVRNMLLNEKRRPDGRAFDEVRPLGCEVGILPRTHGTGLFTRGLTQVMTVATLGSISEIQ
ILDGIDEAESKRYIHHYNFPGYSVGEVKPLRGPGRREIGHGALAERALEPLIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSEDCSQEQVLTDI
QGIEDFFGDMDFKVAGTTEGITSIQVDTKLQGFSFNVVENAIRDARKARLTILKKIEECI
PEPRKDVSIYAPKTETMKIDPEKIRDVIGAGGKVINKIIADTGVKIDIKEDGTVFVSSAD
HDGVNAAMKIIEGLTKEVAAGEVYLGKVTKITTFGAFVEILPNKEGLVHISKLAKERVEK
VEDVVSVGDEILVKVTEIDNQGRINLSRKDALLDKEKKEDK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgtattaacaactgaaattgctggaaaagagctaaaagttgaatttggtaaa
gtgggaatgttatcaaatgcggcaacttttacaagctatggtgatacagtaattttaaca
aatgtaaatgcatctgaagagccaagagaaggaattgatttctttcctttaagtgttgaa
tatgaagaaagattatatgccgtaggtaaaattccaggtggatttataaaaagagaaggt
aaaccatcagaaaaatcaatattaaatggtagagcagttgatagaactatacgaccttta
tttccaaagggttacagaaatgatgttcaagtagtatgtacagttgtatcagttgaaaaa
gatgtactaccagaaatcttagcaattaatgcagcatcgcttgcattatgtctttcaagc
ataccatatacaatcccagcagcagcagttcaagtaggactaataaatggtgaatttatt
acaaatccagattcagaaggtagaaaagaaagtacacttcatctaacagtttgtgctact
aaagaaaaagttatgatgatagaagctggtggagatgaaattccagaggatataatgatt
gcagcaatcaaatatggatttgatgaatgccaaaaaataatttcattccaagaagaagca
atggctaagtttggtaagaaaaaagatgagcctgagttttataaggtggatgaagaagta
gaaaaagatataaaagagtttgctcaagatatggtttatgaagcaatgcatatcacagat
aaagatgaaagaaatgcagctattgatgccataaacgagaaagtacaagaagaatttggc
gaaaaatatgctgaaaaattagcagacataaaggaagttctttacactatgcaaaagaaa
gtagtaaggaatatgcttttaaatgaaaagcgcagaccagatggaagagcatttgatgaa
gtaaggccacttggatgtgaagttgggatacttccaagaactcatggaacaggtttattt
acaagaggattaactcaagttatgactgttgcaacacttggatcaataagcgaaatacaa
attttagatggtattgatgaagctgaatctaagagatatatacatcattataattttcca
ggatacagtgttggagaagttaagccattaagaggtccaggaagaagagaaataggccat
ggagctttagcagaaagagcacttgaaccattaataccaagtgaagaagaatttccatat
actattagattagtatcagaagtattaagctcaaatggttcaacatcacaagcttcagtt
tgtggttctactttagcattacttgatgcaggtgtaccaataaaaagaccagcagctggt
atagcaatgggacttataacttcagaggattgtagtcaagaacaagttttaactgatatt
caaggcattgaagatttttttggagatatggattttaaagtagcaggtactactgaagga
ataacatcaattcaagttgatacaaaacttcaaggatttagttttaatgttgtagaaaat
gctataagagatgcaagaaaagctagacttacaatacttaaaaagattgaagaatgtatc
cctgaaccaagaaaagatgtttctatatatgcgccaaaaactgaaactatgaagattgat
ccagagaagattagagatgtaattggtgctggtggtaaggttattaataaaataatagct
gacactggtgtgaaaatagacattaaagaagatggaactgtatttgtaagctctgcagat
catgatggagttaatgctgctatgaagataatagaaggattaactaaagaagtagcagca
ggcgaggtatacttaggaaaagttacgaaaataactacatttggggcttttgtagaaata
ttacctaataaagaaggattggttcatatttctaagttagctaaggaaagagtcgaaaaa
gtggaagatgttgtttcagttggagatgaaattttagttaaagttacagaaatagataat
caaggacgaattaatctttcaagaaaagatgctttattagataaagaaaaaaaagaagat
aaatag
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