Clostridium neonatale: CNEO_3315
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Entry
CNEO_3315 CDS
T08280
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase (Psi55 synthase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cnn
Clostridium neonatale
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnn03016
]
CNEO_3315 (truB)
Enzymes [BR:
cnn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CNEO_3315 (truB)
Transfer RNA biogenesis [BR:
cnn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CNEO_3315 (truB)
Prokaryotic type
CNEO_3315 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CAH0437884
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All DBs
Position
CNEO:complement(3280169..3281044)
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AA seq
291 aa
AA seq
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MNGILNIYKNKGMSSFDVVRKVKFVAKERKVGHTGTLDPEATGVLPVCLGKATKIIDYIM
NSNKVYEVKFLLGIKTTTYDLEGEVIEKKDISNITHEDVLSAIEYFVGEYDQVPPMYSAL
KKNGVRLYDLARQGIEVEREARRVNILDINNIKIELPYVSMKVTCTKGTYIRSLCYDIGE
KLNVGATMCELNRCSTSVFYEENSVNIDELNEENINNNLITIEEALSFYPKLTVKSSFTK
LLINGVKVFDKRLTNEKVEKDVLYRVYDDKETFIGLGKQDNEGFKIVKLLL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaatattaaatatatataaaaacaaaggcatgtcttcttttgatgtggttaga
aaagttaaatttgtagcaaaggaaagaaaagttgggcatacgggaacgttagatccagag
gcaacaggggttttaccggtttgccttggaaaagctacaaagataatcgactatattatg
aattcaaataaagtatatgaagtaaagtttttattaggtataaaaactactacttatgat
ttagaaggagaagtaatagaaaaaaaagacatttccaatataactcatgaagatgttcta
tctgctattgaatactttgttggtgaatatgatcaggttccgccaatgtattctgcactt
aagaaaaatggtgtaagattatatgatttagcaagacaaggcattgaggtagaaagagaa
gcaagacgagtaaatatactagatataaataatataaagatagaattgccatatgtttct
atgaaagtaacttgcaccaaaggtacatatatacgtagtctttgttatgacattggggaa
aaattaaatgttggagcaactatgtgtgaattaaacagatgcagtacatctgttttttat
gaagaaaatagtgttaacattgatgagttaaatgaagaaaatattaataataatttaatt
acaatagaagaagcactttcgttttatccaaaactaactgttaaaagttcatttacaaaa
cttcttataaatggagtaaaagtatttgataagagattaactaatgaaaaagttgaaaaa
gatgttttatatagagtttacgatgataaagaaacatttataggtcttggaaaacaagat
aatgaaggttttaagatagtaaaattattactttaa
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