Clostridium neonatale: CNEO_3382
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Entry
CNEO_3382 CDS
T08280
Symbol
priA
Name
(GenBank) Primosomal protein N' (Replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cnn
Clostridium neonatale
Pathway
cnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNEO_3382 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnn03400
]
CNEO_3382 (priA)
Enzymes [BR:
cnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNEO_3382 (priA)
DNA repair and recombination proteins [BR:
cnn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CNEO_3382 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
Zn_Ribbon_YjdM
nSTAND_NTPase5
SLFN-g3_helicase
T2SSE
zf-CHY
Zn_Ribbon_TF
Zeta_toxin
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAH0437949
LinkDB
All DBs
Position
CNEO:complement(3344042..3346240)
Genome browser
AA seq
732 aa
AA seq
DB search
MYAEIIINSDALEIDRMFTYKIPDNVTKKIGIGHRVKVPFGARSKPIEGFVFSLIDNDKI
SVQYKIKEIIKVCDDEAILTQDDINLVYFLRRKYLCKYIDAVRMLIPSGIMTGSTKKKKY
VICIEKEDYEDKLKKDSYIELYKYIKENNGVYTKSELTKQKGYSLYCLNKLINDNILKSE
EQVVFRYNIRKYDEDNKKKLTEEQRKCLSTILYGSELKYLIKGVTGSGKTEIYMRIAEEM
LKEGKSVIVLVPEISLTPQMIERFKGRFGRDVALFHSKLSQGERFDEWYRVKEGKARLVI
GARSALFLPLQNLGAIIIDEEHENTYKSEHNPKYHAREVGEFLSEMKNCKLILGSATPSI
ESYYRAINGDYKLVEMNNRVNGKNMPHMEIIDMREELKNKNLSLFSRKLSEEIYKTLEQK
KQIILFLNRRGFSTFISCRSCGYVFKCPECDVSMTYHKNGYLICHYCGRAEKVKKECPKC
NSRYVKFFGAGTERVEQEVKKYFPKARVLRMDVDTTRYKNAHESIYNSFKNKEADILIGT
QMVSKGLDFKDVTLVGVLAADMSLNMPDYRSAERTYQIITQVSGRAGRGEDEGKVIVQSY
TPNHYSLEYAKNENYINLFKEEIRIRQLMGNPPFGKILLINCVSKFEDKLKRFMYNLEGS
LKELILDEEITIYGPVPCIITKLKDNYRWQIILKGKLNDDFNEKVKDTLYQLNKSVYNEI
RVSIDINPNSMT
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagaaataattataaatagtgatgctttagaaatagatagaatgtttacatac
aaaatccctgataatgtcacaaagaaaattggaataggacatagagttaaggttccattt
ggagcaagaagcaagccaattgaaggatttgttttttctttaattgacaatgataaaatt
agtgttcaatataaaataaaggaaataattaaagtttgtgatgatgaggccattttaaca
caagatgatataaatttagtatattttttaagaagaaaatacctttgtaaatatattgat
gcggtaagaatgttaattccaagtggaattatgacaggatctactaaaaagaaaaaatat
gttatatgtatagaaaaagaagattatgaagataaattaaaaaaagatagctacatagag
ttatataaatatataaaagaaaacaatggtgtatatacaaaaagtgagctgacaaaacaa
aagggttattcattatattgtttgaacaaactaattaatgacaatatattgaaaagtgaa
gagcaagttgtatttagatataatattaggaaatatgatgaagataataagaagaaatta
acagaagaacaaagaaagtgtttatcaacaatactgtatggaagtgaattaaaatatcta
ataaaaggggtaactggttctggtaaaacagaaatttacatgagaattgcagaagaaatg
ctaaaggaaggaaaaagtgttattgtgcttgttcctgaaatttcattaacacctcagatg
attgaaagattcaaaggcagatttggcagagatgtagcattgtttcatagtaaattgtct
caaggagagagatttgacgaatggtatagagttaaagaaggaaaagcgagacttgtcatt
ggagcacgaagtgctttatttttaccacttcaaaatcttggcgcaataataattgatgaa
gaacatgaaaatacatacaaatctgaacataatcctaagtatcacgcacgagaagtagga
gaatttttaagtgaaatgaaaaattgcaagttgatacttggttctgcaactccaagtatt
gaaagttattatagagcaataaatggtgattacaaacttgttgagatgaataacagagtt
aatgggaaaaacatgccgcatatggagataatagatatgcgagaagaattaaaaaataaa
aatctttcattatttagtagaaaactttctgaagaaatatataaaacattggaacaaaaa
aagcagataatattatttttaaacaggagaggattttctacatttatttcctgcagaagt
tgtggatatgtatttaaatgtccagaatgtgatgtttcgatgacatatcataaaaatgga
tatttaatatgtcattattgcggaagagcagaaaaagttaaaaaagaatgtccaaaatgt
aatagtagatatgttaaattttttggagctggaactgaaagagtagaacaagaagtgaaa
aaatattttccaaaagcaagagttttaaggatggatgttgatactacaagatataagaat
gcccatgaatcaatatacaattcatttaaaaataaagaagcggatatactaatagggact
cagatggtatccaaaggtctagattttaaagatgttactttagttggggtgcttgcagcg
gatatgtcacttaatatgccggattatagatctgctgaaagaacgtatcaaattataact
caagtatcaggaagagccggaagaggtgaagatgaagggaaagtaatagttcaaagctat
actccaaatcattatagtttagaatatgcaaaaaatgaaaattatattaacttatttaag
gaagaaataagaattagacagttgatggggaatccgccttttggtaaaatattattaatt
aattgtgtgtcaaagtttgaagacaaattgaaaagatttatgtataatttggaaggaagt
ttgaaagaattaatattagatgaagaaattacaatttatgggccagtaccatgtataata
accaaattaaaagataattataggtggcaaataattctaaaaggaaagttaaatgatgat
tttaacgaaaaagttaaagatactctttatcaattaaacaagagtgtatataatgaaata
agggttagtattgatattaatcctaatagtatgacttag
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