Clostridium neonatale: CNEO_3396
Help
Entry
CNEO_3396 CDS
T08280
Name
(GenBank) Putative ABC transporter, ATP-binding/permease protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cnn
Clostridium neonatale
Pathway
cnn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CNEO_3396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnn02000
]
CNEO_3396
Transporters [BR:
cnn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CNEO_3396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
SMC_N
AAA_18
DUF87
AAA_29
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
CAH0437962
LinkDB
All DBs
Position
CNEO:complement(3357393..3359114)
Genome browser
AA seq
573 aa
AA seq
DB search
MFKLRRFLRPYMKETVIGSGAKLFEAILELLLPIFMGKIIDIGIMNNDISYVIKMVVCMF
IIISVGLASASLCQYYASYTCQSVGNDIRKGLLRKISLFSYSDIDRFGNSTLINRITNDV
NQVVLAVAMLIRLVSRAPFLCVGALIMSIYIDPKMSLIFAILIPVFILVIAIIMKRTVPL
YKAAQTKMDELGHVLRENLSGVRVIRAFARHENEKLRIEETTENVSKAYIRVTNLSALMN
PLTSFIMNMGIIALFHFGAINVNIGTLTQGDIVVLINYITQVLLALIVVANLLVTFTKAS
ASASRISEILEYSASIKDELNVDETNMKTLVKNKEIITFENVSFKYNEEEALSNLSFSIY
NGEVFGIIGTTGSGKSTVANLIPRFYDVTKGAVLLGGKDVRKLSQSFLHEQIGIVPQKSV
LFTGTIADNIKWGKEDATRDEIVEALKNAQAYEFVSKMEKGIDSHIYEGGKNFSGGQKQR
LTIARALVKKPSVIILDDSLSALDYETDKKLRKSLVENLKDTTKIIISQRISSIISADKI
LVLDDGRCVGLGTHEELLDRCDTYREIYKSQVK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaaacttagaaggtttcttagaccatatatgaaggagacggtaataggttctgga
gctaaattatttgaagcaattcttgaacttctattaccaatttttatggggaaaataata
gatataggaattatgaataatgatatatcttatgtaataaagatggtagtttgtatgttc
ataataataagtgtaggactagcatcagcttctttatgtcaatattatgcttcttataca
tgtcaaagtgtaggaaatgacattagaaaaggcttattaagaaaaatatcattattttca
tattcagatatagataggtttggaaattcaacacttattaatagaattacaaatgatgtg
aatcaagttgtattagctgtagctatgttaattagacttgtaagtagagctccatttcta
tgtgttggtgcattaataatgtcaatatatatagaccctaaaatgtctttaatttttgca
atcttaattcctgtatttatattagtaatagcaataataatgaaaagaacagttccgcta
tataaagctgctcaaactaaaatggatgaactgggacatgtacttagagaaaatttaagt
ggtgttcgtgtaattagagcatttgcaaggcatgaaaatgagaaactacgtattgaagaa
acaactgagaatgtgtcaaaagcatacataagagtaacaaatttatctgcattaatgaat
ccactaacttcatttataatgaatatggggataatagctttatttcattttggagcaatt
aatgtaaatataggtacattaactcaaggagatattgtagtattaattaattacataaca
caggttttattggctttaatagttgttgctaatttacttgttacatttacgaaagcatca
gcatcagcatctagaataagtgagattttagaatattccgcaagtataaaagatgaactt
aatgtagatgaaactaacatgaaaacattagtaaaaaataaagaaattataacttttgaa
aatgtatcatttaaatataatgaagaagaagcattgtctaatttatctttttcaatttat
aatggagaagttttcggaataattggaacaacaggtagtggaaaatccacagtagctaat
ttaataccaagattttatgatgtaacaaaaggcgctgtgcttttgggtggaaaagatgta
agaaaactttctcaaagttttttacacgaacaaattgggatagtacctcaaaaatctgtt
ttatttacaggaactatagctgataatattaaatggggaaaagaggatgcaactagggac
gaaatagttgaagctttaaagaatgcacaagcttatgaatttgtaagtaaaatggaaaag
ggtatagattcacatatatatgaaggtggaaaaaacttttctggaggacagaaacagaga
ttaacaatagctagggctttggtaaaaaaaccttcagtaattattttagatgatagtcta
agcgcattagattatgaaacggataagaagcttagaaaatctttagttgagaatttgaaa
gataccactaagataataatttctcaaagaataagttcaattatttcagctgataagata
ttagttttagatgatggaagatgtgttggacttggaacacatgaagaattattagataga
tgtgacacctatagagaaatatataaatctcaggttaaataa
DBGET
integrated database retrieval system
