KEGG   Clostridium neonatale: CNEO_3748
Entry
CNEO_3748         CDS       T08280                                 
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
cnn  Clostridium neonatale
Pathway
cnn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cnn00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CNEO_3748 (sigA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnn03021]
    CNEO_3748 (sigA)
Transcription machinery [BR:cnn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CNEO_3748 (sigA)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_1 Sigma70_r1_2 Exonuc_VII_L Not3 HHH_RecD2
Other DBs
NCBI-ProteinID: CAH0438298
LinkDB
Position
CNEO:complement(3696262..3697371)
AA seq 369 aa
MEQKVKGEAIKGKSEKDKNAKMNEVRELLERGKKNGSLTYKEIMEAMDHIDLTPEQIEKI
YEALEAMSVEIIGDDVNEAEELNEDLDLSVPEGIAIDDPVRMYLKEIGKVPLLSSEQEIE
YAKQIEEGNPKAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRK
GYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQELGRDPFPEEI
SKVMDLPVDKVREIQKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQ
LINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSR
SKKLKDYLD
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggaacaaaaagttaaaggtgaagcaataaagggaaagtcagaaaaagataaaaatgca
aaaatgaatgaagtaagagaacttcttgaaagaggtaaaaagaatggttcattaacatat
aaagaaataatggaggcaatggatcatattgatttaactccagaacaaatagaaaagata
tatgaagcattagaagcaatgagtgtagagataattggtgatgatgttaatgaggcagaa
gaattaaatgaagatttagatttatcagttccagaagggatagcaattgatgatccggtt
agaatgtatttgaaagaaatcggaaaggtgccattattatcttctgaacaagaaatagaa
tatgcaaaacaaattgaagaaggtaatccaaaagctaaaaagaaactagctgaagcaaac
ttgagattggttgtaagtatagccaaaagatatgttggaagaggaatgctatttctggat
ttaattcaagaaggtaacttaggtcttataaaagctgtagagaagtttgattatagaaaa
ggatataaattctcaacttatgctacatggtggattagacaggcgataacaagagctatt
gcagaccaagcaagaacaattagaattccagttcatatggttgaaactataaataagctt
ataagagtacaaagacaattattgcaagaacttggtagagatccattcccagaagaaata
tcaaaagttatggatttaccagtagataaggttcgtgaaattcaaaaaatagcacaagaa
ccagtttcactagaaactcctataggtgaagaagaagattctcatttaggagactttatt
ccagatgatgaagcaccagcaccagctgaagcagcagcatttacaatgcttaaagaacaa
ttaataaatgtgttagatacactaactcctagagaagaaaaagtattaagattaagattt
ggtcttgatgatggaagagcaagaactcttgaagaagtaggtaaagaatttaatgtaaca
agagaaagaataagacaaattgaagcaaaagcattaagaaagctaagacatccatcaaga
agtaaaaagttaaaagattatttagattaa

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