Clostridium neonatale: CNEO_4288
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Entry
CNEO_4288 CDS
T08280
Symbol
oppD
Name
(GenBank) Oligopeptide ABC transporter, ATPase component
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
cnn
Clostridium neonatale
Pathway
cnn01501
beta-Lactam resistance
cnn02010
ABC transporters
cnn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CNEO_4288 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNEO_4288 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CNEO_4288 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnn02000
]
CNEO_4288 (oppD)
Transporters [BR:
cnn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CNEO_4288 (oppD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
AAA_22
AAA_7
TniB
AAA_23
FtsK_SpoIIIE
NPHP3_N
DUF87
NACHT
AAA_16
DUF3987
AAA_15
Motif
Other DBs
NCBI-ProteinID:
CAH0438816
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All DBs
Position
CNEO:complement(4271916..4272983)
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AA seq
355 aa
AA seq
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MKKEKVLEVRDLSISFTTSAGKVNTIRGVNLDLYKGETLAIVGESGSGKSVTMKAVMGIL
SSNGEINSGNIKFSYYRDKEKVDVDILKLSKKEMRQRINGKRIAMIFQDPMTSLNPTMTI
GAQIMEGMIWHYKTPKKEAHDKAVELLKLVGITDAENRMKNYPHQLSGGMRQRVVIAIAL
ACNPDLLICDEPTTALDVTIQAKILELIKDIQKKLNISVIYITHDLGVVAKVADYVTVMY
AGKIVEKGTINEIFYDPRHPYTWGLLSAMPDLDTNDDKLYTIPGSPPNLANKVEGDAFAP
RNIYALNIDNRLEPPMFKISDTHYAATWLLHENAPKVEMPAELKQRIDRMLKEAE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaaaaagtactagaagtaagagatttatcaatatccttcactacatcagct
ggaaaggtaaatacaataagaggcgtaaacctggatttatacaaaggtgaaacacttgcg
atagtaggagaaagtggaagtggtaaatcagtaacaatgaaagctgttatgggaatacta
agcagcaatggagaaattaattctggaaatattaaattctcatattatagggataaagaa
aaggttgatgttgatatattaaagctttcaaagaaggaaatgagacaaaggattaatgga
aagagaatagctatgatattccaagatccaatgacatcacttaatccaacaatgacaata
ggtgctcaaataatggaaggaatgatatggcattataagacacctaaaaaggaagcacat
gataaagcagttgaacttttaaaacttgttggaattactgatgctgaaaatcgtatgaag
aattatcctcatcagctttcaggtggtatgagacaaagagttgttatagctattgcactt
gcatgtaatccagatcttttaatttgtgatgagccaacaacagctttagatgtaacaata
caagctaaaatattagaattaataaaagatattcaaaagaaattaaatatatcagttatt
tatattactcatgaccttggtgttgtcgcaaaagttgctgattatgttactgtaatgtat
gcaggtaaaatagttgaaaaaggaacaataaatgaaatattttatgatccaagacatccg
tatacatggggcttattatcagctatgcctgatttagatactaatgatgataaactttat
acaataccaggaagtcctccaaaccttgcaaataaggtagaaggagatgctttcgcacca
agaaatatctatgctttaaatatagataatagacttgagcctccaatgtttaaaataagt
gatactcactatgcagcaacttggcttttacatgaaaatgcgccaaaggtagaaatgcct
gctgaattaaaacaaagaatagacagaatgttaaaggaggctgagtaa
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