Clostridium neonatale: CNEO_4444
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Entry
CNEO_4444 CDS
T08280
Name
(GenBank) Putative ATP-binding protein UPF0042, contains P-loop
KO
K06958
RNase adapter protein RapZ
Organism
cnn
Clostridium neonatale
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnn03019
]
CNEO_4444
Messenger RNA biogenesis [BR:
cnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CNEO_4444
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Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_33
DUF2380
AAA_28
Sigma_reg_C
AAA_24
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAH0438964
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Position
CNEO:complement(4441422..4442306)
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AA seq
294 aa
AA seq
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MRFVIVTGLSGAGKTQATRSLEDLGYFCVDNLPPTLISKFAEACMQSGGNIEKVALVIDI
RGGVFFDDFFDTLNYLKRNEFKYEILFLDASDEVLIKRFKETRRSHPLSPDGRVLTGITQ
EREKLREIKNIADIIIDTSKYEIRHLREKINETYGDNKNPERQLSITVLSFGFKYGIPVD
SDLVFDVRFIPNPFYIPELKEYSGNDAPVKEYVLKQSETVTFIDKLIDMLKYLIPNYRKE
GKRQLIISIGCTGGRHRSVAIANEIHRRLNEENYNAKIEHRDVAEDLHKGEKKL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgttatagtcacaggattatcaggagcaggaaaaactcaagcaactagaagt
ttagaagatttgggatatttttgtgtggataatcttccacctacactaatatctaaattt
gcagaagcatgtatgcaaagtggtggaaatattgaaaaagtagcattagttattgacatc
agagggggagtattctttgatgatttctttgatacattaaattatttaaaacgtaatgaa
tttaaatatgagatactatttttagatgctagtgatgaagttttaataaagagatttaaa
gaaacaagaagaagtcatccactatctccagatggaagagtacttacaggtataactcaa
gaaagagagaagctaagagaaataaaaaatattgcagatattattatagatacatctaaa
tatgaaataagacatttaagagaaaaaattaatgagacatatggtgacaataagaatcca
gaaagacagttatctattacagttttaagttttggatttaagtatggtataccagtagat
tcagatttagtatttgatgtaagatttataccaaatccgttttatataccagaattaaaa
gagtattctggaaatgatgcacctgtaaaagaatatgtattaaaacaatctgaaacagtt
acttttatagataaattgatagatatgttaaagtatctaattcctaactatagaaaagaa
ggaaagagacaattaattatatctataggatgtacaggtggaagacatcgttcagtagcc
atagcaaatgaaattcatagaagattaaatgaagaaaattataacgctaaaatagagcat
agagatgttgcagaagatcttcataaaggagaaaagaagctatga
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