Clostridium neonatale: CNEO_4544
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Entry
CNEO_4544 CDS
T08280
Symbol
oppD
Name
(GenBank) Oligopeptide ABC transporter, ATPase component
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
cnn
Clostridium neonatale
Pathway
cnn01501
beta-Lactam resistance
cnn02010
ABC transporters
cnn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cnn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CNEO_4544 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNEO_4544 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CNEO_4544 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnn02000
]
CNEO_4544 (oppD)
Transporters [BR:
cnn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CNEO_4544 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
RNA_helicase
DUF87
ResIII
TniB
DO-GTPase2
NACHT
NPHP3_N
AAA_22
nSTAND3
AAA_7
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
CAH0439040
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All DBs
Position
CNEO:complement(4548430..4549437)
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AA seq
335 aa
AA seq
DB search
MEKLLEVKNLKTEFKTNVGQVHAVRGVSFYLDKGEALGIVGESGCGKSVTMMSIMRLLAD
NGKIADGQIYFDGKDISKAKDSEMDSIRGNDIGMIFQDPMTSLNPVFTIGDQLMEPLLKH
RGMKKEEAKKQAINMLKLVGIPSPEKRMKQYPHEFSGGMRQRAMIAMSLICEPKLIIADE
PTTALDVTIQAQILDLMKDLKDKLNTSIILITHDLGVVADLCSRINVMYGGIVVETGTTE
DIFYRPKHPYTWGLLRSVPNPKENTKEKLKPIEGQPPDLLKPPVGCPFAARCDYAMKICI
NKQPPQFEVGENHSAACWLCHEDAPKVESPIRRIK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttattagaagtaaaaaatttaaaaactgaatttaaaactaatgttgggcaa
gtacatgctgtaagaggagtttctttttatctagataaaggtgaagcattaggcattgtt
ggagaatcaggatgtggaaaaagtgtaacaatgatgtcaataatgagacttttagctgat
aatggaaagattgcagatggtcaaatatattttgatggaaaagatatttcaaaagcaaag
gattctgaaatggattcaattagaggtaatgatataggaatgatattccaagatcctatg
acatcattaaatcctgtttttacaataggagatcaattgatggaaccattacttaagcat
agaggaatgaaaaaagaagaagcaaaaaaacaagctattaatatgcttaaattagttgga
attccaagtccagaaaaaagaatgaaacaatatccacatgaattttcaggtggaatgagg
caaagagctatgatagctatgagtttaatttgtgaacctaagcttattattgcagatgag
ccaacaactgcacttgatgttacaatacaagcacaaatactagatcttatgaaagattta
aaagataagcttaatacatcaataatattgataactcatgatttaggagttgttgcagac
ctttgcagcagaataaatgttatgtatggtggaatagttgtagaaacaggtacaactgaa
gatatattctatagaccaaaacatccatacacatggggacttttaagaagtgttcctaat
cccaaagaaaacacaaaagaaaagctaaaaccaatagaaggacagccgccagatttgtta
aaaccaccagttggatgtccgtttgcggctagatgcgactatgcaatgaaaatttgtata
aataaacagcctccacaatttgaagtaggagaaaatcatagtgctgcttgttggttatgc
catgaagatgcaccaaaagttgaatcgcctataaggaggataaaatag
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