Clostridium novyi: NT01CX_0037
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Entry
NT01CX_0037 CDS
T00431
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cno
Clostridium novyi
Pathway
cno02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NT01CX_0037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cno03021
]
NT01CX_0037
Transcription machinery [BR:
cno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NT01CX_0037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
ABK62245
UniProt:
A0Q1P4
LinkDB
All DBs
Position
complement(1694879..1695985)
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AA seq
368 aa
AA seq
DB search
MTEAKKNNSKKNNVKDNKDKMKIIKSLIDKGKKKGSLTYKEIMDELDNVELSPEQIEKVY
AVLESMDIEVIGDMKDMETEEEEEIDLSVPEGISIDDPVRMYLKEIGKVPLLTPDEEIDL
AQRIEEGEMYAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKG
YKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPQPEEIA
KIMEMPVDKVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQL
INVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRS
KKLKDYLD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagctaaaaagaataatagtaagaaaaataatgtaaaagataataaagataag
atgaagattataaaaagtcttattgataaaggaaagaaaaagggtagtttaacatataaa
gaaataatggatgaacttgataatgttgaattaagtccagaacaaatagaaaaagtttat
gctgttctagaatcaatggatatagaagttattggtgatatgaaagatatggagacagaa
gaagaggaagaaatagatctttcagtaccagaaggaatatcaatagatgatccagttaga
atgtatctaaaagaaataggaaaagtacctcttttaactccagatgaggaaatagatctt
gctcaaagaatagaagaaggcgaaatgtatgcaaagaaaaagcttgcagaagcaaactta
agacttgttgtaagtatagctaaaagatatgtaggtcgtggaatgttattcctagatctt
attcaagaaggaaatttaggacttataaaagcagtagaaaaatttgattatagaaaagga
tataaatttagtacctatgctacatggtggattagacaggcaataacaagagcaattgct
gaccaagcaagaacaattagaattcctgtgcatatggttgaaacaataaataaactcata
agggtatcaagacaacttcttcaagaattaggacgtgaaccacagccagaagaaatagcg
aagataatggaaatgcctgtggataaggttagagaaatcatgaaaatagctcaagaacca
gtatcacttgaaactcctattggtgaagaagaagatagccacttaggtgactttatacct
gatgatgaagctccagctccagcagaagcagctgcatttactatgttaaaagaacaatta
ataaatgttttagatacattaactccaagagaagaaaaggttctaagattaagatttggt
cttgatgatggtagagcaagaactcttgaagaagttggaaaagagtttaatgtaacaaga
gaaagaataagacaaattgaagcaaaagctttaagaaaactaagacatccaagcagaagt
aaaaaattaaaagactatttagattaa
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