Clostridium novyi: NT01CX_0435
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Entry
NT01CX_0435 CDS
T00431
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA, putative
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cno
Clostridium novyi
Pathway
cno03420
Nucleotide excision repair
cno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NT01CX_0435 (pcrA)
03430 Mismatch repair
NT01CX_0435 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cno03400
]
NT01CX_0435 (pcrA)
Enzymes [BR:
cno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NT01CX_0435 (pcrA)
DNA repair and recombination proteins [BR:
cno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT01CX_0435 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NT01CX_0435 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
MsddA-like
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABK60509
UniProt:
A0Q2Q4
LinkDB
All DBs
Position
complement(2112649..2114931)
Genome browser
AA seq
760 aa
AA seq
DB search
MDLKKLLNKEQYEAATAIEGPVLVLAGAGSGKTRVLTYRIAHMIEDLGIPQYNILAITFT
NKAAGEMKDRIKKLVSNNIDSMWVSTFHSSCVRILRREIDKLGYNKNFAIYDSTDQKNLV
KQCMKELNISDKDINEKEIISKIGKQKDNLITAEEYKKRNEKDFRKNRIADVYLLYQKKL
KNSNALDFDDLIFKTVELFKKHPEVLEFYQNKFKYIMVDEYQDTNKTQYQLVKMLAAAHR
NIFVVGDDDQCIYQWRGADIKNILDFEKDYPEAKVVKLEENYRSKANILNAANTVIKHNS
QRKNKVLRTQNENGEKIKIYRAYSDMDEGLFISNEIKRLIKKENRSYKDFAILYRTNAQS
RVFEDVFMKRDIPYRIIGGLKFYDRKEIKDITAYLKFINNLQDDISLKRIINVPKRAIGA
ATVSKIQDFANYMDECMYSVLLDVENIPGLSKRSISSINKFTSLINGFTRTKDKVSVSNL
IQEILESTGYMKELKDSNEIEDISRIENIKELVSAAVEFENTSEDKSLSAFLEKITLVSD
VDNYDEDTDTTVMMTLHSAKGLEFPVVFMVGMENGIFPGAQSLENFAEMEESRRLCYVGI
TRAKEQLYMTSASTRKVFGRSVAYSESDFINEISPNLKEMVREGRTESAVKSSTVRLNSV
ANGATISSHSLSSFGVKKAEKTINSILSNSYTSQGSNEKGNKKDLNLDEITVGRKVSHDK
FGVGTIVSATKTNNDVKVTIAFDNMGIKQLMFSMAPIKLI
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagaaactactaaataaagagcaatatgaagcagctacagccatagaaggt
ccagttcttgtattagcaggagcgggttcaggaaagactagagtattaacatatagaata
gctcatatgatagaagatttaggaattcctcaatataatatattagctataactttcact
aataaagcagctggagagatgaaagatagaataaaaaaattagtatctaataatattgat
agtatgtgggtatcaactttccactcttcatgcgtaagaattttaagaagagagatagac
aaactaggatataataaaaattttgctatatacgatagtacggatcaaaaaaacttagtt
aaacaatgtatgaaggaacttaacataagtgacaaagacattaacgaaaaagagataata
tctaaaataggaaaacaaaaggataacttaataacagcagaagaatataaaaagagaaat
gaaaaagactttagaaaaaatagaattgctgatgtttatcttttgtatcaaaagaaatta
aaaaatagtaacgcgttagattttgatgatttaatttttaaaacagttgaattatttaaa
aagcatcctgaagttttagagttttatcaaaataagtttaagtacataatggtagacgaa
tatcaagataccaacaaaactcaatatcaacttgtaaagatgttagcagctgcacacaga
aatatatttgtagttggtgatgatgaccaatgtatatatcaatggagaggtgcagacatt
aaaaatattttggattttgaaaaggattatccagaagctaaagttgtaaaactagaagaa
aattatagatcaaaagctaacatactaaatgcagcaaatacagttataaaacataattct
caaagaaaaaataaagttcttagaactcaaaatgaaaatggagaaaaaattaaaatctat
agagcttattcagatatggatgaaggactttttatctcaaatgaaataaaaagacttatt
aaaaaagaaaatagaagctataaggattttgcaatattatatagaaccaatgctcaatca
agagtatttgaagatgtatttatgaaaagagatataccttacagaataattggtggatta
aaattctacgatagaaaagaaataaaagatataactgcttatttaaaattcataaacaat
cttcaagatgatataagcttaaaaagaataataaatgttccaaagagagctataggtgca
gctacagtatcgaaaatacaagattttgcaaattacatggatgaatgcatgtatagtgta
cttttagatgtagaaaacattccaggactttcaaagagaagtatttcttctataaataaa
tttacaagccttataaatggttttacaagaacaaaagataaggtaagtgtatcaaatctt
atacaagaaatattagagagtacaggctatatgaaagagcttaaagattccaatgaaata
gaagacattagtagaatagaaaacataaaagaattagtgtctgctgctgttgaatttgaa
aatacttcagaggataagtctctatcagcatttcttgaaaaaataacattagtatctgat
gtagataactatgatgaagatacagatactacagttatgatgacactacatagtgcaaag
ggacttgaattcccagtagtatttatggtaggtatggaaaatggaattttcccaggagct
caatctttagagaattttgctgaaatggaagagtcaagaagactttgttatgtgggtatc
acaagagcaaaagaacaactttatatgacttcagctagtacaagaaaagtttttggaaga
agcgttgcgtatagtgaatcagattttataaatgaaatatcaccaaatctaaaagaaatg
gtgagagaaggaagaactgaaagtgcggttaagtcatcaactgtaagattaaacagtgtg
gcaaatggtgctactataagttctcattcattatctagttttggtgtaaaaaaagctgaa
aaaactataaattccatattgagcaacagctatacatcacaaggttccaatgaaaaggga
aataaaaaggatttaaatttggatgaaataacagtgggaagaaaagttagccatgataaa
tttggtgttggtacaatagttagtgctacaaaaaccaataatgacgtaaaagtgaccata
gcttttgataatatgggaataaagcaattaatgttcagtatggcaccaataaagcttatt
taa
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