Clostridium novyi: NT01CX_1237
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Entry
NT01CX_1237 CDS
T00431
Name
(GenBank) HD domain protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cno
Clostridium novyi
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cno03019
]
NT01CX_1237
Messenger RNA biogenesis [BR:
cno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NT01CX_1237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ABK61627
UniProt:
A0PY68
LinkDB
All DBs
Position
351935..352918
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AA seq
327 aa
AA seq
DB search
MQGGIIVEILVKPIEEFKVNDKIEGFFLIKTAECRTASNSKKYLDFTIADKTGEINGKFW
NYNEGDEEVYKPNTLIKVRGSVTLWQNNMQFKIDRIRLPRKNEDVNIADFVPSAPYSPES
MYKEMMDFVSKIKDEDIRNIINYILDENKHKIMHFPAAKKNHHAIRSGLLYHTTTMLKAG
EKLSEVYTFINTDLLFGGVILHDLAKMDEMNSSELGIVDDYTIEGQLLGHIIEGVKNIEV
AAQKVGADKEVTMLLQHMILSHHYEPEFGSPKKPMIPEAQMLHFLDVMDASLYDMKKAIG
ETNRGEFSNPVWSLDKRKIYRPVREDL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggggaataatcgtggagatactagtgaaacccatagaagaatttaaagtaaat
gacaaaatagagggattttttttaataaaaactgctgaatgtagaacggctagcaatagt
aaaaaatatttagatttcactattgcagacaaaacaggagaaataaacggaaagttttgg
aattacaatgaaggtgacgaggaagtttacaaacctaatacactaataaaagtaagaggt
agtgttacattatggcaaaataatatgcaatttaaaatagatagaattagattgccaaga
aaaaatgaagatgttaacatagcagattttgtgccttctgcaccatattctccagaaagt
atgtataaagagatgatggattttgtatctaaaataaaggacgaggacataagaaacata
ataaattatattttagatgaaaataagcacaaaataatgcactttccagcagctaaaaaa
aatcatcatgctataagatctggacttttatatcatacaacaactatgcttaaagcagga
gaaaaattatcagaagtatatacttttataaacactgatttattgtttggaggagtaata
cttcatgatcttgcaaaaatggatgaaatgaattcaagtgaacttggaatagttgatgat
tacactatagaaggacaattattaggacatataattgaaggggtaaaaaatatagaagta
gcagcacaaaaagttggtgcagataaagaagttacaatgcttttacaacatatgatatta
tctcaccactatgaacctgaatttggaagtcctaaaaaaccaatgataccagaagcacaa
atgcttcactttttagatgttatggatgcaagtctttatgacatgaaaaaagcaattggt
gaaacaaatagaggagaattttcaaatcctgtatggtctttagataagagaaaaatatat
agacccgtaagagaagatttatag
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