Clostridium novyi: NT01CX_1251
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Entry
NT01CX_1251 CDS
T00431
Name
(GenBank) exonuclease, putative
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cno
Clostridium novyi
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cno03400
]
NT01CX_1251
DNA repair and recombination proteins [BR:
cno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NT01CX_1251
Archaeal homologous recombinant proteins
NT01CX_1251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
CCDC-167
Mce4_CUP1
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABK60933
UniProt:
A0PY82
LinkDB
All DBs
Position
367945..371475
Genome browser
AA seq
1176 aa
AA seq
DB search
MKPRVLKISGLNSFEREQVINFNRLTEKGLFGIFGPTGSGKSTILDAITIALYGKITRTN
KGFINTTTKDLIVSYEFEIGGAKDRKVYLAERNIKINKNDRYNTKYARLIEKNGDKSKII
AEGPTELQNQIHKIIGLTVDDFTRSVVLPQGKFSEFLKLGGREKRNMLERIFALEKYGQS
LVEKIKKVRNTNLKERDVLQGELKKYENLTEEDYKAKQQELQLELQNEERLKNEKKQIDE
KYEMYKEVWTLQKELDAFIDKKLKLQEKLEDINLKRESLKRGQNAIKIKPFMDEVEATNK
NIKDNREKLKEAIDNLEGISEKVKVTEENYIVSEKEKDERIPELRNMERDFLLAIDTINK
TEKLEMEVNSLRNEYKSIKSKRDKIVKQLKEIDDNKKKLAIEIKDIEERLNEIKIDPEYR
EKLQYALQIENDYKKSLNNKKELNNKLQEKEKNLKEVSKEYNGVLSSKNSQDNLVKQLEE
KNKILKENNPGDNSLLLEKSQELNVIAKKVEEVINEINRKSDLEKIIKDINDRKNPLTTK
LEEVKNDLDKNKKELQELDNKTENIKKNNLASLLASELVEGSPCPVCGSIHHTDIAKKID
NNEILKHEENRKKLQQIIEDLNNKMTQLSIEVAGISKEEEHSREELKSVLESLENVDITE
LNKEKESKEAKFKELKEKIDKYNSEKNDIESTLQIEREKKSKIDLAESKLSENVKNEILL
IKELKGELEKENKNFHGLSNEYESLKEYFCAEEISLKAKEVLKIEKESERLKNKEKELRS
IVENYDVNKQTLADEDKKLIEVLSQIQQSGIEKSNVIKENKEDIKRLCGDKNPKEYLPKI
KKEIKEISDRNTKLKKQLDEEKELKEKISNEKLTLEKAANIFDETLKQQQSKLEMSLKDN
EFNDVLEVKKYLLDEVTLLSMENEINIFDDEVKEVKSNIKRIEEKLQGNRIEKEAWEELT
SYKSEIDKHISDNIKKIATLQKIIDDFKEDLKNLMELRKREKQLDHKLSLIRDLMKLVEG
NKFVEFVAMNQLKYIAREASKRLKDITRDRYALEIDSEGNFAIRDDFNGGQIRDASTLSG
GETFLTSLSLALSLSSQVQLKGSAPLEFFFLDEGFGTLDTDLLDIVMSSLEKLHSSRLSV
GIISHVEELKNRVPVKLIVSPAKPGEGGSKVTLEYS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctagagttcttaaaataagtggacttaatagttttgagagagaacaagtaata
aattttaatagattaactgaaaagggcttatttggtatatttggtcctacaggaagtggt
aaatctactatattagatgccataactattgcattatacggaaaaataacaagaacaaat
aaagggtttataaatacaacaactaaagatttaattgtaagttatgaatttgaaattggg
ggagcaaaggatagaaaagtttatttagctgaaagaaatataaagataaataaaaatgat
agatacaatactaaatatgctcgtttaatagagaagaacggtgataaatctaaaatcata
gctgaaggacctactgaacttcaaaatcaaatacataaaataattgggcttacagtagat
gatttcacaagatctgttgtgttgccacagggaaaatttagtgagttcttaaaattaggt
ggaagagaaaaaagaaatatgctagagagaatttttgcccttgaaaagtatggtcaatct
ctagtggaaaagattaaaaaagttagaaatactaatttaaaagaaagagatgttttacaa
ggagaacttaaaaaatatgaaaatttaactgaagaagattataaagcaaaacaacaagaa
cttcagttagaattacaaaatgaagaaagattaaaaaatgaaaagaaacaaatagatgaa
aaatatgaaatgtacaaagaagtttggacgcttcaaaaagagttagatgcttttatagat
aaaaaattaaaattacaagaaaaattagaagacataaatttaaagagagaaagcttaaaa
agagggcaaaacgcaataaagataaaaccatttatggatgaagtagaagccactaataaa
aatataaaagataatagagaaaaattaaaagaagctatagataatttagagggtatatcc
gaaaaagtaaaagtcacagaagaaaattatattgtttctgagaaagaaaaggatgaaagg
attccagaacttagaaatatggagcgtgattttttattagctatagacactataaataaa
acagaaaaactagaaatggaagttaactctttaagaaatgagtataaatctataaaaagt
aagagagataaaatagttaaacaactaaaagagatagatgataataagaaaaaattagct
attgaaataaaggatattgaagaaagattaaatgagataaaaatagatccagaatacaga
gaaaaactacaatatgcattacagatagaaaatgactataaaaaatcattgaacaataaa
aaagaattaaataataaacttcaagaaaaagagaaaaatttaaaggaagtatcaaaagaa
tacaacggcgttttaagtagtaaaaattcacaagataatttagtgaaacaattagaagaa
aaaaataagattcttaaagaaaataatccaggggataattcattattacttgaaaaatcc
caagaattaaatgttatagctaaaaaagttgaagaagtaataaatgaaatcaatagaaaa
agtgacctagaaaaaattataaaagacattaatgacagaaaaaatcctcttactactaag
ttagaagaagtaaaaaatgatttagacaagaacaaaaaagaattacaagagctagataac
aaaacagaaaatataaagaaaaataatttagcaagtttacttgccagtgaattagtggaa
ggaagtccatgtccagtttgtggttctattcatcacactgatattgctaaaaaaatagat
aataatgaaattctaaaacacgaggaaaatagaaaaaaacttcaacaaataattgaggat
ttaaataataaaatgactcagttatctattgaagttgctggtatatcaaaggaagaagag
catagtagagaagaattaaaatcagtattagaaagtttagagaatgttgatataacagaa
ttaaataaagaaaaagaaagtaaagaagctaaatttaaagagttaaaagaaaaaatagat
aaatataatagtgaaaaaaatgatatagaatcaactttgcaaattgaaagagagaaaaaa
tcaaaaatagatttagctgaatctaagttaagtgaaaatgtaaaaaacgaaatcttattg
attaaagaattaaaaggggaattagaaaaagaaaataaaaactttcatggtttatctaat
gaatatgaatcattaaaggaatatttctgtgcagaggaaatttcattaaaggcaaaagaa
gtattaaagattgaaaaggaatcagaaaggctaaaaaataaagaaaaagaattaagaagt
atagtagaaaattatgatgttaacaaacaaactttagctgatgaagataaaaagttaata
gaagttttaagtcagatacaacaaagtggcatagaaaaaagtaatgtcataaaagaaaat
aaggaagatataaaaaggctttgtggtgataaaaacccaaaagaatatttacctaaaata
aaaaaagaaattaaagaaatatcagatagaaatactaaattaaaaaaacaattagatgaa
gaaaaagaacttaaagagaaaatttctaatgaaaaattaactttagaaaaagcagcaaat
atttttgatgaaactttaaaacagcaacaatcaaaattagaaatgtccttaaaagataat
gagtttaatgatgttttagaagtaaaaaaatatttattagatgaagttacattattaagt
atggaaaatgaaataaacatttttgatgatgaggttaaagaggtaaaaagtaatataaaa
agaatcgaagagaagttacaaggaaatcgaatagaaaaagaagcgtgggaagagttaact
agttataaatcagaaatagataaacatatatctgataatataaagaaaatagctacactt
caaaaaatcattgatgacttcaaagaagatttaaagaatttaatggagctaagaaaaaga
gaaaaacaattagatcataaattaagtcttatacgtgatttaatgaaactggtagaagga
aataaatttgtagagtttgttgccatgaatcaattaaaatatatagcaagagaagcatct
aaaagacttaaagatataacaagagatagatatgcacttgaaatagattcagaaggaaac
tttgcaattagagatgactttaatggtggacagataagagatgcaagtacattatcaggg
ggagagaccttcctaacatcattatcattagcactatcactatcatctcaagttcagcta
aagggaagtgcgccacttgaatttttcttcttagatgaaggatttggtacactagataca
gatttattagacattgttatgagctctcttgaaaaacttcacagttctagactgtctgtt
ggaattataagtcacgttgaagaattaaaaaatagagtacctgtaaagctaatagtttct
cctgcaaaacctggtgaagggggaagtaaggtaacattggaatatagttaa
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