Clostridium novyi: NT01CX_1299
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Entry
NT01CX_1299 CDS
T00431
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cno
Clostridium novyi
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cno03009
]
NT01CX_1299 (rumA)
Enzymes [BR:
cno01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NT01CX_1299 (rumA)
Ribosome biogenesis [BR:
cno03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NT01CX_1299 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
PrmA
Methyltransf_15
MTS
Methyltransf_11
TRM5-TYW2_MTfase
N6_N4_Mtase
UPF0020
Ubie_methyltran
Methyltransf_12
2-ph_phosp
DUF3201
Baculo_PEP_C
Methyltransf_24
PCMT
Methyltransf_23
TPMT
Motif
Other DBs
NCBI-ProteinID:
ABK60542
UniProt:
A0PYD0
LinkDB
All DBs
Position
428564..429982
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AA seq
472 aa
AA seq
DB search
MNKVIPVEKNKEYIVEISSLGFEGEGIAKIDNYTIFIKDALVGEKVKIKIVKVKKNFAYG
KLIDILEESRDREKPVCDIYKRCGGCSIQHFNYKSQLEFKKNRVKDCLERIGKLEVSINN
EETGNGCDENKGIILHDTLGMKNPYRYRNKVQLPVGEENGEIKVGFYAPRSHDIIDMDIC
HIQDEVGDTIVSLIKQWMKTYNIKPYNEEKNTGIVRHIMVRRGFNTNEVMIVLVTRTNEL
PHKEELVELILKKIDGITSIVQNINSKKTNVILGLENITLYGKDYISDYIGEFKFNISPL
SFFQVNPIQTEVLYNKALEYAALTGNEVVFDAYCGTGTISLFLSKNAKKVYGVEIVDAAI
ENAKINAKENNVDNAEFIVGKSEEVIPNLINQGIKADVVVVDPPRKGCDKALLDAIGNMK
PDRIVYVSCDPGTLARDLAILGELGYATKEVQPVDMFPQTGHVECVVKLERK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagttatacctgttgaaaaaaataaagaatatattgtagaaatttcatctcta
ggttttgaaggagaaggaattgcaaaaatagataattatacaatatttattaaagatgca
ttagttggggaaaaggttaagataaaaatagttaaggtaaaaaagaattttgcctacgga
aaactaattgatatattagaggaatcaagagatagagaaaaaccagtatgtgatatttat
aaaagatgtggtggatgtagcattcaacatttcaattataaatctcaattagaatttaag
aaaaacagagttaaagattgtttagagagaataggaaaattagaagtttctattaataat
gaagaaactggtaacggttgtgatgaaaataaaggaattatacttcatgatacactagga
atgaaaaatccttatagatatagaaataaggttcaacttcctgttggagaagaaaatgga
gaaattaaagtaggattttatgctccaagaagccatgacataattgatatggacatttgt
catatacaagatgaagttggagatactatagtaagtttaataaaacagtggatgaaaact
tacaatataaaaccttacaatgaagaaaaaaacactggtattgtaagacatataatggtt
agacgtggctttaatacaaatgaagttatgattgttttagttactagaacaaatgaatta
ccacacaaagaagaattagtagaattaatattaaagaaaatagacggaataactagtata
gttcaaaacataaactctaaaaaaactaatgtaatattaggattagaaaacataacttta
tatggaaaggactatataagtgactatataggtgaatttaaatttaatatatcaccgtta
tccttctttcaggttaatccaatacaaacagaagtattgtacaataaagcattggaatat
gcagcattaacaggaaatgaagtagtatttgatgcttactgtggaacaggaacaatatca
ctattcctatctaaaaatgcaaaaaaagtatatggtgtagaaatagtagatgcagctatt
gaaaatgcaaaaataaatgcaaaagaaaacaacgtagataatgctgaatttatagttggt
aaatcagaagaagttataccaaacttaattaatcaaggaataaaggctgatgtagttgta
gtagatccaccaagaaaaggctgtgataaagcactactagatgccataggaaacatgaaa
ccagacagaatagtatatgtatcctgcgatccaggcacacttgcaagggacttagccatt
ttaggtgaattaggatatgcaactaaagaagttcaaccagttgacatgttccctcaaaca
ggtcatgttgagtgcgtagtgaagctggaaagaaaataa
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