Clostridium novyi: NT01CX_2151
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Entry
NT01CX_2151 CDS
T00431
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cno
Clostridium novyi
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cno03032
]
NT01CX_2151 (topA)
03400 DNA repair and recombination proteins [BR:
cno03400
]
NT01CX_2151 (topA)
Enzymes [BR:
cno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NT01CX_2151 (topA)
DNA replication proteins [BR:
cno03032
]
Prokaryotic type
DNA Topoisomerases
NT01CX_2151 (topA)
DNA repair and recombination proteins [BR:
cno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NT01CX_2151 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
Toprim_4
Zn_ribbon_8
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
ABK61225
UniProt:
A0Q0S2
LinkDB
All DBs
Position
complement(1357770..1359860)
Genome browser
AA seq
696 aa
AA seq
DB search
MGQKLVIVESPAKAKTIGKYLGKNYIVTASMGHVRDLPKSQLGVDIENNYNPKYITIRGK
GELLSSLRKQAKKSDKVFLATDPDREGEAISWHLAEALKIDENEECRIEFNEITKNAIKS
AIKNPRRLNLNLVDAQQARRVLDRLVGYKISPILWRKVKWGLSAGRVQSVALKMICDREN
EIKEFNPKEYWTIECELKNEKSKKSFTVKLVSKNNEKIEINNEEESNSIIKELKQNKYIV
KSIKKSEKHKKPLPPFTTSTFQQDSYKKLNFSTKKSMSVAQQLYEGIDIKGKGTIGLITY
MRTDSVRISDEAQKNARQFITENFGQNYVPESIRNFKGKKNIQDAHEAIRPTYIELAPDE
IKDNLKPDQFKIYNLIWKRFMASQMADCIMDTMSININNGQYTLRVSGSNIKFDGFKKVY
KYEEDEESLKFPVLEENEILQDKKVEGKQHFTQPPARFSEATLVKTLEENGIGRPSTYAP
IVSTLLDRKYIEREKKTLTPTELGFIVNNIVSEYFKQIVDVEFTAEMESKLDNIEEGKEK
WKDVVNEFYSPLIECINIAEKEIAKIKIEDEVTDIKCDKCGRNMVIKHGRFGDFLACPGY
PDCKNTKPIVKELDVPCPVCGGKILLRKSRKGRKFYGCSNYPECNFVSWSEPVKDKCPNC
GSYMVKKQSKSKGNYIECSNKECKTKIQQENQNVEK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagaaactagttatagtagaatctccagcaaaagctaaaactataggaaaatat
ttaggcaagaattatatcgttacggcctccatgggtcatgtaagagatttacctaagagt
caattaggcgttgatatagaaaataattataatcctaaatatataactataagaggcaaa
ggggaattattaagttctttaagaaaacaagcaaagaaaagtgataaagtctttcttgca
accgaccctgatagagaaggggaagctatatcttggcatcttgcagaagctttgaaaata
gatgaaaatgaagagtgcagaatagaatttaatgaaataacaaaaaatgctataaaatca
gctataaaaaatcctagaaggttaaatttaaatttagtagatgcacaacaagcaagaaga
gttttagatagattagttggatataagataagtcctatactttggagaaaagttaaatgg
ggattaagcgcaggaagagttcaatcagttgcattaaagatgatatgtgatagagaaaac
gaaataaaagaatttaatcctaaagaatattggacaatagaatgcgaattaaaaaatgaa
aaatctaaaaaatcatttacagtaaaattagtatctaaaaataatgaaaaaattgagatc
aacaatgaagaagaaagtaattcaataataaaagaattaaaacaaaacaaatacattgtt
aaaagtataaaaaaatcagaaaagcataaaaaaccattgccaccatttacaacaagtact
tttcaacaagattcatataaaaagctaaatttttcaacaaaaaaatctatgtctgttgct
cagcaattatatgaaggaatagacataaaaggaaaaggaactataggtcttataacatat
atgagaacagattctgtacgtatatctgatgaagcacaaaaaaatgctagacagtttatt
acagaaaattttggacaaaattatgtaccagaaagtattagaaatttcaagggaaagaaa
aatattcaagatgcccatgaagctattagacctacatatatagaacttgcaccagatgaa
ataaaagataatttaaaaccagatcaatttaaaatatataatttgatttggaaaagattc
atggcaagtcaaatggcagattgcataatggatactatgtccataaatataaataatgga
caatatacattaagagttagtggttcaaatataaaatttgatggttttaaaaaagtatat
aagtacgaagaagatgaagaaagtttaaaattccctgtattagaggaaaatgaaatactt
caggataaaaaagtagaaggtaaacaacactttactcaaccacctgcaagattttcagaa
gcaactttagtaaaaacattagaagagaatggtataggaagacctagtacttatgcacct
atagtatctacattactagatagaaagtatattgaaagagaaaaaaagacgttaactcca
acagaacttggatttatagtaaacaatattgtaagtgaatattttaaacagatagtcgat
gttgaattcacagctgaaatggaaagtaagctagataatatagaagaaggaaaagaaaaa
tggaaagatgttgttaatgaattctactctccgttaattgaatgtataaatatagcagaa
aaagaaatagcaaagataaaaattgaggatgaagttacagatataaaatgtgacaaatgc
ggaagaaatatggttataaaacatggtagattcggagattttctagcgtgtccaggatat
cctgattgtaaaaacacaaaaccaatagttaaagaactagatgtaccatgccctgtgtgt
ggtggaaagatactacttagaaaaagtagaaaaggaagaaaattttatggttgtagcaat
tatccagaatgtaattttgtaagttggtcagaaccagtaaaagataagtgtcctaattgt
ggaagctatatggttaaaaaacaaagcaaatcaaaaggaaattatatagaatgttcaaac
aaagaatgtaaaacaaaaatacaacaagaaaatcaaaatgttgaaaaataa
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