Clostridium novyi: NT01CX_2246
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Entry
NT01CX_2246 CDS
T00431
Name
(GenBank) primosomal protein N`
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cno
Clostridium novyi
Pathway
cno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NT01CX_2246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cno03400
]
NT01CX_2246
Enzymes [BR:
cno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NT01CX_2246
DNA repair and recombination proteins [BR:
cno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NT01CX_2246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
PIF1
AAA_19
T2SSE
TrwB_AAD_bind
nSTAND3
SLFN-g3_helicase
AAA_11
NPHP3_N
DnaB_C
FtsK_SpoIIIE
Flavi_DEAD
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ABK62165
UniProt:
A0Q117
LinkDB
All DBs
Position
complement(1435998..1438199)
Genome browser
AA seq
733 aa
AA seq
DB search
MYQYAGIVVNNESVQVDKIFTYKIPEELIGKLKVGHRVKVPFGKGNKNIDGFVIELYEEF
HNKYKIKSITNICDEFTVLREKDIELIKKMKEKYLCTYLECIKVIIPTGIIKGVRNKIKE
VIYIGNNLSEKFNKEPYTSIYNVVKSNNGVYSKTEISKNFKLSLSSINTMIKHGFLTKNE
TIVNRFNNNVYSNYEEKTLNEEQKVVTDFILNSNNKLFLIHGITGSGKTEIYMNMVKNMI
SQNKECVILVPEISLTPQMVERFKGRFGKDIAVFHSKLSDGERYDEWLRIKNKQVKVAIG
ARSAIFLPFDNLGMIIIDEEHEGSYKSDSNPKYNAREIGELKCNIENCKLVLGSATPSVD
TYYRCMKGEIELLTLKNRADGATLPDVYTVDMREELRSGNRSIFSNALYDGIEKALNNKE
QIILFLNRRGFSTFVSCRECGYVFKCKHCDISLTYHSKGDYLSCHYCGEKYKVPKICPKC
GSKYVKYFGVGTERIEREVKKYFPDARTLRMDFDTTRKKNSYDYIYNTFKNGEADILIGT
QMVTKGLDFKNVTLVGVIAADVSLNLPDFRSGERTFQLITQVGGRAGRGSKKGSVVVQTY
SPENYSIRYSATSDYENFYKEEIGLRYDMDYPPFSKILAINISSKNENLLIKNIQKIGVI
LKNSLEKNNKIDMLGPCPCSISKVKEFYRWQILIKGQFDNKLALNIKKIIYKNLQDVYND
VRISIDINPSTLL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcaatatgctggaatagtagtaaacaatgaatcggttcaagttgataaaattttt
acttataaaataccagaagagttaataggaaaactaaaggttggtcatagagttaaagtg
ccttttggaaagggaaataaaaatatagatggatttgttatagaattatatgaagaattt
cataataaatataaaataaagtccattacaaatatctgtgatgaattcactgttttaaga
gaaaaagatatagaacttattaagaaaatgaaagaaaagtacctctgtacatatttagag
tgtataaaagtaataattcctacaggaataataaaaggagttagaaataaaataaaagag
gtaatatatataggaaataatctttcggaaaaatttaataaagaaccttatactagtata
tataatgtagtaaaatcaaataatggagtatattctaaaacagaaataagtaaaaatttc
aaattatccttatcatctattaatactatgattaaacatggatttttaactaaaaatgaa
actatagtaaataggtttaataataatgtctatagtaactatgaagaaaagactttgaat
gaggaacaaaaggtagttacagattttatattaaattcaaataataaattatttttaatt
catggcataacaggtagtggaaaaaccgagatctatatgaacatggtaaaaaacatgata
agtcaaaataaagaatgtgtaatactagttcctgaaatatctctaacacctcagatggta
gaaagatttaaaggtcgatttggaaaagacattgctgtatttcatagtaaactttctgat
ggagaaagatatgatgaatggcttagaataaaaaacaaacaagttaaagtagctataggt
gcaagatcagctatatttttgccctttgataatttaggtatgataattatagatgaggag
catgaaggaagttataagtctgatagtaatcctaaatacaatgctagggaaattggagaa
ctaaagtgcaatattgaaaattgtaaacttgtactaggttctgctacaccctctgttgac
acttactatagatgtatgaaaggcgaaatagaattacttactctaaaaaatagagctgat
ggagccactttgccagatgtatacacagtagacatgagggaagaacttagaagtggaaat
aggtctatttttagtaatgctttatatgatggaatagaaaaagcactaaacaataaggaa
caaataattttatttttaaatagaagaggattttctacctttgtatcatgtagagagtgt
ggatatgtgtttaaatgtaaacattgcgatatatctcttacttatcatagcaaaggagat
tatttaagttgtcattattgtggagaaaaatataaagttcctaaaatatgtcctaaatgt
ggaagtaaatatgtaaaatattttggtgttggaactgaaagaattgaaagagaagttaaa
aagtattttccggatgctagaacactgagaatggattttgataccacaagaaaaaagaat
tcttatgattacatatataatacttttaaaaatggagaagcggatatattaataggtact
caaatggtaacaaagggactagactttaaaaacgttacattggttggggtaatagcagca
gatgtgtccttaaatcttccggattttagatcaggagagagaacttttcaacttataact
caagttggaggaagagctggaagaggttcaaaaaaaggaagtgttgtagtacagacatat
agccctgaaaattatagtataagatattctgcaactagtgattacgagaatttttataaa
gaagaaataggacttagatatgatatggattatccacctttttctaaaatactagctata
aacattagcagtaaaaatgaaaatttattaataaaaaatatacaaaaaattggtgtaata
ttaaaaaattcacttgaaaaaaataataaaatagatatgttaggaccatgtccttgttca
atttcaaaagtaaaggaattttacaggtggcagatattaataaaaggccaatttgataac
aaattagcattaaatatcaaaaaaattatttataaaaacttacaagatgtttataatgat
gtaaggataagtattgatattaatccaagtacactattataa
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