Chryseobacterium nepalense: M0D58_06765
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Entry
M0D58_06765 CDS
T08142
Name
(GenBank) peptidoglycan DD-metalloendopeptidase family protein
Organism
cnp
Chryseobacterium nepalense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UPQ77249
LinkDB
All DBs
Position
complement(1577095..1580238)
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AA seq
1047 aa
AA seq
DB search
MSKKGVSKISGNPTPTIGEKTTYIVTDWYPSTPAGERNPAAITWELFKKRANGSFTSTNI
KKKGDGSFTFGEVAAKNTYRLEAYLHEPEGSGPTTIDITPQPAGTPEITKVELRYADDTP
GTVFSYTDKLIAKALCVNLTGKKLVFTLWEDDAAGNGHNSGNLFVDSREAIVDRTGTAAA
EFVLTKALMQKAAQGETDPQKLEFYVTVEYYSNRKHATNNVAVQNPEYKEPAQQTQQSGS
SQQNSGNPQPSQQQPVSKTQQSEEADQPTQPDASNQTNGTIEPEQQPTPQQTEGKTTSVV
QEPKAESLLDAYFAKEEFTKETDETDGNYTYTFASNNNNINKDTVAQIIKGKVDPAIKKD
KKYAKFETIKNALTKTSYAKGETISFALHKLGPVFVKINNAPLEEEVYVVATTMLLDGKE
VSINIKEKEPVLIEKDASLPVLEAKENGAEITTLKAVAQNGIAKVKIKLRPKSDDTLKEW
KEKLTGIKDGTHTYTFGGNGNATATTQQKKKIAGIIINKIKAELAEQKKFAKSEAIEQAF
TKEVYNKDEQITFDVYKNVTEYLWLKAECTGNLQKHEGEFLKKDGAYFEIGKKCPRCTEK
ITIEQIEELYGALPAHKAFRQEVVDNLNKYIFDSGKEIHINTCLRKAHFFAQVGAETLGI
NPDWMVETDKFRYSKSRSLSIFGQRAANLNAAGLLETYCSENPQKRLMNYMYAAENGFGN
GNGNEASGDGYLFRGRGLKQLTGRGNYRSAANYIKEIFPDEYTDLEADPDKVKEAKYAVL
TAIAFWEKHEIWKTADTVKVSTLDNVKKVRKLVNPGLAGLGDAKSYFDKGINVFKVNSCS
PVEGGDSAWHDPIDNPQRTYYNSSGAHKEQNGAFGPVRTKIVNGQAVPKNHQGLDIFADI
DTPCKACLDGTIVSYMNEGSAGYGNVLVLEVSGEDLRKAKRNYTHEFTAEVESGSGFDIN
ADKFYLRYAHLKSAVKTSGEVTAGETICYSGDSGNASGVPNPHLHFEVAMNATGNGTGLQ
NRYNPAYFVRLTAIDQPAQQTVKEARS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaaggagtttcaaaaatttcaggaaatccaacgccgaccattggggaaaaa
accacctatatcgttacagactggtatccttcaacacctgccggggaaagaaatcctgcc
gcaataacctgggagctttttaaaaaaagagctaacggaagttttacttcaaccaatatc
aagaaaaagggagacggaagctttacgtttggcgaagttgcggcaaaaaatacctatcgt
ctggaagcttatctccatgaaccggaaggcagcggcccaacaaccatcgatattactcca
cagcctgcaggaacgccggaaattaccaaagtagagctccggtacgccgatgatacgccg
ggaactgttttcagctataccgataaacttattgctaaagcgctctgcgtaaatcttacg
gggaaaaaactggtatttacgctttgggaagatgatgcagcaggaaacggccataattcc
ggaaatctctttgtagacagccgcgaagctattgtagacagaaccggaactgccgctgct
gaatttgttttaacaaaagctttaatgcagaaagcagctcagggtgaaacagatccacag
aaacttgaattttatgttaccgtagaatattacagcaacagaaaacatgctaccaataat
gttgcagttcagaatccggaatataaagaaccggcacagcagacgcagcaatcgggttcg
tcgcagcaaaattccggaaatccgcagccttctcagcaacagccggtttcaaaaacacaa
caaagtgaagaagcagatcagccaacccaacctgacgcctccaatcaaaccaatggaacc
atagagccggaacagcagccaactcctcaacaaacggaaggaaaaacgacaagtgttgta
caggaacccaaagctgaaagtctgctcgatgcctattttgcaaaggaagaatttacaaag
gaaaccgatgaaacagatggcaattacacttacacatttgcatcaaacaacaataatatc
aataaagatactgttgcgcagattattaaaggcaaagtagaccctgccataaaaaaggat
aaaaaatacgcgaaatttgagactataaagaacgcactcacaaaaacttcttatgcgaaa
ggggaaactatttcttttgctttacataaactgggtcctgtatttgtaaaaataaataat
gcaccgctggaagaagaagtatatgtagtggcaactaccatgcttcttgacggtaaggaa
gtaagcataaatattaaagaaaaagaacctgtattaatcgaaaaggacgccagtcttccc
gtattggaagccaaagagaacggtgccgaaataacaactcttaaagcggtcgcacaaaac
ggaattgctaaagttaaaataaaactccgtccaaaatccgatgatacgctgaaagaatgg
aaggaaaaattaacgggaataaaagatggaacccacacctatacattcggggggaacggc
aatgctacagcaacgacacagcaaaagaaaaaaattgcaggaattattattaacaaaata
aaagccgaactggcagaacagaaaaaatttgcgaagagtgaggctattgaacaggcattt
accaaagaagtttacaataaagacgagcaaattacttttgatgtttataaaaacgtaacc
gaatatttgtggctaaaagccgaatgcacaggaaatttacagaaacatgaaggcgaattt
ctgaaaaaagacggagcctatttcgagatcgggaaaaaatgcccgagatgtacggagaaa
attaccattgagcaaattgaagagctgtatggcgctttaccggcgcataaagctttcaga
caggaagtggtagataatctgaacaaatatatttttgattcaggcaaagaaattcatatc
aatacctgtctcagaaaagctcatttctttgcgcaggtaggtgctgaaacattaggaatc
aacccggactggatggtagaaacagataaattccgctattctaaatcaagaagtttgagt
attttcgggcaaagagcagccaacctcaacgccgcaggccttctggaaacctattgcagc
gaaaatccgcagaaaagactgatgaattatatgtatgctgcagaaaacggctttggaaac
ggaaacggaaacgaagccagtggcgacggttacctgttcagaggtagagggctaaaacag
cttacaggccgcggaaattacagaagtgcagccaactatatcaaggaaatttttcctgat
gaatacacagatctcgaagcagatcctgataaggtaaaagaagccaagtatgcagtttta
acggcaattgctttctgggaaaaacacgaaatctggaaaacggcagacaccgtaaaagtt
tctacgctggataatgtgaagaaggtgagaaaacttgttaatccgggattggcaggatta
ggagatgccaaatcatatttcgacaaaggaatcaatgtatttaaagtaaattcatgttct
cctgttgaaggaggtgattctgcatggcatgacccgatagacaatccgcaaaggacgtat
tataattccagcggtgcccataaagagcaaaacggagctttcggaccggtgagaacaaaa
atagtgaacggacaggctgttccgaaaaatcatcaggggcttgacatctttgcagatata
gatacgccgtgcaaagcctgtctggacggaaccattgtgagctacatgaatgaaggaagt
gcaggctatggaaatgtgctcgttctggaagtcagcggggaagatttaagaaaagccaaa
agaaattatacgcacgaatttaccgcagaggtagaaagtggatcaggttttgatattaat
gctgataaattttatcttcgttatgcccatttaaaatcggcagttaaaacaagtggagaa
gtaacggctggtgaaactatctgttattcaggtgattccgggaatgcaagcggggttccg
aatccgcatctgcactttgaagttgccatgaatgctaccgggaacggaacaggccttcag
aaccggtacaaccctgcttattttgtaaggcttacagcaatcgatcagccggcgcaacag
actgtaaaggaagcaagatcttaa
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