Chryseobacterium nepalense: M0D58_06800
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Entry
M0D58_06800 CDS
T08142
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
cnp
Chryseobacterium nepalense
Brite
KEGG Orthology (KO) [BR:
cnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnp03032
]
M0D58_06800
03036 Chromosome and associated proteins [BR:
cnp03036
]
M0D58_06800
03400 DNA repair and recombination proteins [BR:
cnp03400
]
M0D58_06800
DNA replication proteins [BR:
cnp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M0D58_06800
Chromosome and associated proteins [BR:
cnp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M0D58_06800
DNA repair and recombination proteins [BR:
cnp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M0D58_06800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
COMMD9_HN
DUF4777
DUF937
Motif
Other DBs
NCBI-ProteinID:
UPQ77256
UniProt:
A0ABY4K8Z5
LinkDB
All DBs
Position
1586332..1586622
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AA seq
96 aa
AA seq
DB search
MTKAELVNTISNKLGTEKNETQKVVEAFMQEIRTSMYNGDNVYLRGFGSFIIKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKSFVEKVKTKVTVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaattggtaaacaccatctcaaataagttgggaaccgaaaagaatgaa
acacagaaagttgtagaagcttttatgcaagaaatcagaacttctatgtataatggagat
aatgtttatttgagaggttttggatcttttatcattaaaacaagagcagctaaaacggga
agaaacatctccaagaatactgcgattgaaatccctgcacataacattcctgctttcaag
ccatcaaaatcttttgtggagaaagtaaaaacgaaagttaccgtaaaataa
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