Chryseobacterium nepalense: M0D58_06990
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Entry
M0D58_06990 CDS
T08142
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cnp
Chryseobacterium nepalense
Pathway
cnp03420
Nucleotide excision repair
cnp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M0D58_06990
03430 Mismatch repair
M0D58_06990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnp03400
]
M0D58_06990
Enzymes [BR:
cnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M0D58_06990
DNA repair and recombination proteins [BR:
cnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0D58_06990
MMR (mismatch excision repair)
Other MMR factors
M0D58_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
UCH
ResIII
Motif
Other DBs
NCBI-ProteinID:
UPQ77289
LinkDB
All DBs
Position
complement(1624554..1626887)
Genome browser
AA seq
777 aa
AA seq
DB search
MEDYLKGLNESQFEAVTTLQGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILALTFT
NKAAKEMKERIAKVVGQSNARSLWMGTFHSVFARILRNEAHYLGYPSNFTIYDQQDALNV
IKKVLKDMNIDADLYKPKKVQARISTYKNNLITVKAYYANPELIEADEKANMKFIGQIYQ
RYVEQCFKNGSMDFDDLLLKTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPEAVTVSLEQNYRSTQNIVNAANV
VIAKNLQQFKKNVFSENEEGDKIKIYRSLSDADEANFVAGNIWETRNREQRKYSDFAILY
RTNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIAYLRLLVNENDSEALMRIINYP
ARGIGETTQNKLVVFADAQNVSVSKVLDNLTMYSPHLGFNNGVLNKLSDFWSMIKAFQVL
LKTETAYSVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQMQLEDGDP
SLPNFLENIALSADTQDKNNEEDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSSTR
EDLEEERRLFYVALTRAEKQAFFSYAISRFQWGKITDAEPSRFLSEIDDIYLEFVNPAIE
KRFINNSGVRSNIFDEHPSEMRSFKKVEKKTIERSGDSKPIAEPRKLKPVSTAKIINPSG
ASSQDIEVGDKVRHDRFGIGEVTFLDGTDPQNIKAKVIFQHEGEKNLILKYAKLTKI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggaggattatctgaaaggactgaatgaatcacaatttgaagctgttaccacgttacag
ggaccgttaatggttcttgcgggagcaggttcagggaagacgcgtgtgcttaccatgcgt
atcgcacatctcattacaaacggcgtagatccttttaatattttagcattaacctttacc
aacaaggcagcaaaagaaatgaaggaacgtattgccaaagtggtggggcagagcaatgca
agaagtctctggatgggaacttttcactcggtttttgcaaggattctgagaaatgaagcg
cactatctgggatatccttccaattttaccatttatgatcagcaggatgccctgaatgtc
atcaaaaaagtattgaaagatatgaatattgatgccgatttgtataaacctaaaaaagtt
caggcaagaatttctacctataaaaataatctgattaccgtaaaggcttattatgccaat
cccgaacttattgaggccgacgaaaaggccaatatgaagtttattgggcagatctatcag
cgatatgttgagcagtgcttcaaaaacgggtctatggattttgacgaccttttgcttaaa
accaatgagctgcttacccgctttccggaagtactggctaagtatcaggacagattcagg
tatattctcgtggatgagtatcaagataccaaccattcccagtaccttattgtaaaagcg
ttggcttcaaaatttgaaaatatctgcgtcgtgggagatgatgcacagtctatttactca
ttccgtggtgccaatatctataatattttaaactttaaaaaagactatccggaagcagta
acagtttccctggagcagaattaccgttctacccagaacattgtaaatgcggccaatgtg
gttattgctaaaaaccttcagcagttcaagaagaatgttttcagtgaaaatgaagaagga
gacaaaatcaagatttaccgctctctttcagatgccgatgaagcgaattttgtggccgga
aatatctgggaaaccagaaaccgtgaacagaggaaatacagtgattttgcaatcttatac
cgcaccaactcccagacacgggcttttgaagatgcattaaggcgtaagaatattccgtat
aaagtatatggaggtctgtctttctatcaaaggaaagaggtaaaagacctgattgcctac
cttcggcttttggtgaacgaaaatgattctgaagcattgatgcggattattaattatcct
gcaagaggaatcggtgaaactactcagaacaagttggttgtatttgctgatgcacaaaat
gtttcggtatcgaaagtattagataatcttacgatgtattcaccgcatttaggctttaac
aatggcgttttgaataagctcagtgatttctggtcgatgattaaagcatttcaggtattg
cttaaaacagaaacggcttacagtgtggccatggaagttgccaaaagaagcggactgatt
aaattcctaaaagacgatcagacaccggaaggaatttcccgtgtagaaaacgttcaggaa
ttaatgaactctatgcaggggtttatcgaagagcagatgcagctggaagacggtgatcca
agcttaccgaatttccttgaaaatattgccctttccgcagatacccaagataaaaataat
gaagaagatatggtttctttaatgaccattcacctttcaaaagggctggaattcccggtt
gtacatctggtgggtctggaagaaaacctgttcccgagctttatgagttcatctaccagg
gaagatctcgaagaagaaagacgtttgttctatgttgctctcacgagagctgaaaagcag
gcttttttctcatatgccatttcacgatttcagtgggggaaaattactgatgcggaaccg
tcaagattccttagtgaaattgatgatatctatctggaattcgtaaatccggctattgaa
aaacgtttcatcaataattcaggggtaagatccaatattttcgacgagcatccgtctgaa
atgagaagtttcaaaaaagttgaaaagaaaaccatcgaaagaagcggagattctaaacct
attgcagaaccgagaaagcttaaaccggtgagcactgcaaaaatcatcaatccgagcggc
gcatcttctcaggatatagaagtaggcgataaagtaagacacgaccgtttcggaatcggt
gaagtgactttcctggatggtaccgatcctcagaatatcaaagcaaaggttattttccag
catgaaggagaaaaaaatcttattctgaaatatgctaaactaactaagatttaa
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