Chryseobacterium nepalense: M0D58_10955
Help
Entry
M0D58_10955 CDS
T08142
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
cnp
Chryseobacterium nepalense
Pathway
cnp02010
ABC transporters
cnp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cnp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
M0D58_10955
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M0D58_10955
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnp01002
]
M0D58_10955
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnp02000
]
M0D58_10955
Peptidases and inhibitors [BR:
cnp01002
]
Cysteine peptidases
Family C39
M0D58_10955
Transporters [BR:
cnp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
M0D58_10955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
DUF87
ABC_ATPase
AAA_22
nSTAND3
AAA
ECH_2
AAA_16
DEAD
AAA_23
Sigma54_activat
CbiA
AAA_25
AAA_24
NACHT
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
UPQ74572
LinkDB
All DBs
Position
complement(2493536..2495695)
Genome browser
AA seq
719 aa
AA seq
DB search
MKKDILIKQHDLKDCGAACLASVSAYYGLKMPIAKIRQFSHTDTRGTNVLGMIQGLEKMG
FNAKGVKGGADALPEIPLPAIAHIITKEQYHHYVVIYKVSKSKIEIMDPAFGKIEEYTIE
EFSNIWTGVLILLEPNEYFEQKDEKISIYSRFWNLVQPHKSILIQALIGAVIYTILGLST
SIYIEKITDYVLIDANRRLLNLLSVGMIIILFFQIFIGVMKSVLVLQTGQRIDKHLILGY
YKHLLKLPQRFFDTMKVGEIISRVNDAVKIRSFINDVAIQIFVNIFIVIFSFALMFTYYW
KLALITALIIPFYFFVYWLTNRLNRKVERRLMEESAELESHLVESITSVKTIKQFGIETF
ANNKTDNSFSTLLKTIYKSALNSLFSGDSTEFLSRIFTIVLLWVGSGYVIDRTITPGELL
SFYALIGYFTNPVSQLIGMNKIIQNALIAADRLFEIMDLEREETTDKMDIKKENIQDIQF
KEVSFSYGSRTDVFEDFNCIIKKGKTTAIVGESGSGKSTLAALIQNLYPLKKGKVMIGDY
DINYISNHSLRNLISVVPQQIDLFSGNIIENIALGEDFPDVQKILNITKDLGILAFVEKL
PNGFQTYLGENGALLSGGQKQRIAIARALYKNPEILILDEATSSLDTEAEQMIQKTLDDF
KNQGKTMIVIAHRLSTVASADEILVMKDGKIVEQGDHKALLSKDSIYKQMWEKQSISLN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagacatcttaataaaacagcatgatcttaaagattgtggagctgcctgtctc
gcatcggtttcagcttattacgggctaaaaatgcccatcgcaaaaattcgtcaattcagc
catactgatacacggggaacaaatgtactgggaatgatacagggcttggagaaaatgggc
ttcaatgcaaaaggagtaaaaggcggcgcagatgccttacctgaaattccacttcctgcc
attgcccacatcattactaaagagcaatatcatcattatgtagttatttataaagttagc
aaaagtaagattgaaataatggatcctgcttttggaaaaattgaagaatacactattgaa
gaattctcaaatatctggacaggcgttttaatattgcttgagcccaacgaatattttgaa
caaaaagatgaaaagataagtatttatagtagattttggaatctggtacagccccataaa
agcattctgattcaagctttaattggtgcagtaatttacactattttgggtttatcgact
tctatttatattgaaaaaatcaccgattatgttcttatcgacgcgaaccgaaggctactc
aatttgctgtcagtcgggatgattattatcttgttttttcagatatttatcggggtaatg
aaatcagttctggtcttgcagacaggtcaaagaattgacaagcatcttattttaggatat
tataaacatttgctgaagcttcctcaaagatttttcgatacaatgaaagttggcgaaata
atatcccgggtgaatgatgccgtaaaaataaggtctttcatcaacgatgtagcaatccaa
atatttgtgaatatttttattgttattttctcctttgcgctgatgtttacttattattgg
aaactcgcactaataaccgcattaattattccattctatttttttgtttattggctaacc
aatagacttaacagaaaagttgagcgtagattaatggaagaaagcgcagagttggaatcc
catttggtagaatctataacatctgtaaaaactattaagcaattcggaatagaaactttt
gccaataataaaaccgataattcattttcaacactgttgaaaaccatttacaaatctgcc
ctcaacagtttgttttctggcgattctacagagtttttatcaagaatatttactattgtt
ttgctgtgggtgggttctggttacgtgattgacagaactataactcctggtgaactcttg
tctttttatgcattaatcgggtattttacgaatcccgtttctcaattgataggaatgaat
aaaataattcaaaatgcattaattgcagcagaccgtttatttgaaattatggatttagaa
cgcgaagaaacgaccgataaaatggatattaaaaaagaaaatatacaggacattcagttt
aaggaagtaagtttcagctatggaagcagaactgatgtttttgaagacttcaactgtatt
ataaaaaaaggaaagaccactgcaatagtaggagaaagcggaagcggaaaatcaacatta
gctgcacttattcaaaatttatatcccttgaaaaaaggaaaagtaatgatcggggattat
gatattaattatatttcaaaccattcgctacgaaacctgatatcggttgttcctcaacag
atcgatttattttcaggaaatataatagaaaatattgctttgggagaagattttccagat
gtacagaaaattctaaacataacaaaagatctggggattctggcatttgtggaaaaactg
ccaaatggatttcaaacttatttaggcgaaaatggagcgttgctatcaggtggacaaaaa
caaagaattgctattgcaagagcattgtataaaaatcccgaaatactaattttagatgaa
gcgacatcttcgttagatacagaagctgaacaaatgattcaaaaaacattggatgatttc
aaaaatcaaggaaaaacaatgattgttattgcccataggttaagtactgttgccagtgct
gatgaaattttggtgatgaaagacggtaaaattgtagaacaaggagatcacaaagcactc
ctttcaaaagattccatttataaacaaatgtgggaaaaacaaagcatttctttaaattaa
DBGET
integrated database retrieval system
