Chryseobacterium nepalense: M0D58_14225
Help
Entry
M0D58_14225 CDS
T08142
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cnp
Chryseobacterium nepalense
Brite
KEGG Orthology (KO) [BR:
cnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnp03400
]
M0D58_14225
DNA repair and recombination proteins [BR:
cnp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M0D58_14225
Archaeal homologous recombinant proteins
M0D58_14225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UPQ75194
LinkDB
All DBs
Position
complement(3171076..3174111)
Genome browser
AA seq
1011 aa
AA seq
DB search
MIPIQLTLEGIYSYQERQKIDFENLTAAGLFGIFGAVGSGKSSILEAISFALYGETERLN
ARDRRTYNMMNLKSNRSYIEFDFISSENKKYRATREFKRNSKNFEDVKTPSVTFYEWKNN
NWIPLDHSNAEQIVGLSYANFKRTIIIPQGQFKEFLELGAADRTNMMKEIFGLQRFDLQN
NVSLINAKNRSELDQLEGQLKGFEEVNEEKISSIKETLNQEQEKYQAVLKQFQETENTYS
RLKSLKEDFEVLEEKKAHFQKLSEQKENVDLLETKTELYDRISRIFIPLFSEKNKLVKEI
EEQARLKEHQLAIVKNTELQFEKLKNKLAAIQPQYEVLHQSKLQENDLGMILQMIKVSDE
IKILKERTENGSQKVTEVQAVQKQIQEKIEELFKKSEALKPGKIDPGLLLSVGNWFLEQK
KLKENLNIQIKKADAKKNEIISISEELTFLKINPENFKDDFRIQAENLENQKRKLYEKRN
QLEVQQKLSHFASELHDGEACPLCGSLEHPNMMQYHDVTSELHDIQQQMDQLDHQKEDIQ
KKLSAAEKVLDRRKIFEEQLKYEEDQAKQIQIEIEKHLKSFTWKEFNADHEADFEEQRQR
SFTIEKLLEELNEQISTEQKNLDKERNNLDNYNKALEKFRLDEAKKEEQIKTNEANLKIL
EWKNYTGKTAQEVEEIFHKLSESNRETEQNYNQLIKEEKEISPKLAEQKTIVSQLEKRIS
ELEQEMAGNMLLIETALAEQQFDQHKVLEILAEKIDVQEAKGLIEEFKIKFQTLKNSITE
LEQKLKNFAFDQEEFSAVESRFASLETEVKTANDTIVKIKSEIERLEKEFKKKEDLLKLL
SQLKKRAENLKIMTNLFKGAGFVQYVSSIYLRQLCDHANVRFHRMTRNQLSLQLNDNNEF
EIIDYLNEGRSRSVKTLSGGQAFQVSLSLALALAESVQSNAKAEKNFFFIDEGFGTQDLE
SVNIVFETLVNLQKENRIVGIISHVEELKEKIPVSLNIIKDEEKGSQIEIV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgattccaattcagctaactttagaaggtatttattcttaccaggaacgtcagaaaata
gattttgaaaatcttacggcagcaggactattcggtattttcggagccgtaggttcagga
aaatcttcaatcctggaggctatttcatttgcactctacggtgaaaccgagcgacttaat
gcccgcgaccgacgtacttacaatatgatgaacctgaaatcaaaccgatcttatatcgaa
tttgattttataagctctgaaaataaaaaataccgcgcgacacgtgaatttaaaaggaat
tctaaaaattttgaagatgtaaaaacaccgtcggtcacattttatgagtggaaaaacaat
aattggatcccgcttgatcattcaaatgcagaacagattgtaggattaagctatgctaat
tttaaaaggacgattattattcctcagggacaatttaaagaatttctggaactgggagct
gccgacaggacaaatatgatgaaagagatcttcgggctccagcgctttgatcttcaaaac
aatgtttcgcttattaatgctaaaaaccgctcagaacttgatcagctggaaggacaactg
aaagggtttgaagaggtaaatgaagaaaagatttcatcaattaaagaaaccctcaaccag
gaacaggaaaaataccaagcagtattgaaacaattccaggagacagaaaacacctattcc
aggctgaagagtttaaaagaagactttgaagtactggaagagaagaaagcccattttcaa
aagctttccgaacaaaaagaaaatgttgatcttctggaaacaaaaacggaactctatgac
cggatatcccggatatttatccctttgttttctgaaaaaaacaagctggtaaaagagatt
gaagaacaagcccggctcaaagaacaccagctggccattgtaaaaaacacggagcttcaa
tttgaaaagctgaaaaataaacttgctgcaatacagcctcagtacgaagtcctgcatcaa
tctaaactccaggaaaatgatttgggcatgatcctgcaaatgataaaagtttccgatgaa
attaaaatcctgaaggaaagaactgaaaacggatcccaaaaggtaacagaagtgcaagcc
gttcagaaacagattcaggaaaaaatagaagagctttttaaaaaatctgaagctttaaag
cccggaaaaattgatcccggattacttttgagcgtaggaaactggtttctggaacagaaa
aaattaaaagaaaacctgaacatccaaatcaaaaaagctgatgctaaaaaaaatgaaatt
atttctatttccgaagagctcacatttttaaaaattaatcctgaaaactttaaagacgat
ttcaggattcaggctgaaaatctggaaaatcagaaaagaaaactgtatgaaaaacggaat
cagctggaagttcagcagaaactttctcattttgccagcgaactgcatgacggagaagcc
tgtccgctttgcggctctctggaacatccgaatatgatgcaatatcatgacgtaacgtca
gaattacatgacattcagcagcaaatggatcagctggatcatcagaaagaagacattcag
aaaaaattatcagcagcggagaaagttcttgaccgtaggaaaatctttgaagaacagctg
aaatatgaggaagatcaggcaaaacagattcagattgagatcgaaaagcatcttaaaagt
tttacctggaaagaatttaatgcagaccatgaagctgattttgaagaacagagacaacgt
tctttcactatcgaaaagcttctggaagaactgaatgagcaaatcagtacggaacagaaa
aacctggacaaagaaagaaacaatctcgacaactacaataaggcactggaaaaattccgg
ctggacgaagcgaaaaaagaagaacagatcaaaaccaatgaagccaacctgaaaattctg
gaatggaaaaattatactggtaaaacagctcaggaagtggaagaaatttttcacaagctc
tccgaatccaatcgcgagacggagcagaattataatcagttaattaaagaagaaaaagaa
atttcgcccaaactggcagagcagaaaaccattgtgagtcagttggaaaaacggatctcc
gaattggaacaggaaatggcaggcaatatgcttttaattgaaacagcattagccgaacag
caatttgaccagcataaagtgctggaaattctggcagagaaaattgatgttcaggaggca
aaaggtcttattgaggaatttaaaattaagtttcaaaccttaaaaaacagcatcactgag
cttgaacaaaaattaaaaaatttcgcctttgaccaggaagagttttcagcggttgaaagc
cggtttgcctcccttgaaacagaagtaaaaactgctaacgacactattgtaaaaattaaa
tccgaaattgaaaggctggagaaagaatttaagaaaaaagaagatcttctaaagctttta
tcacagcttaagaaacgggcggaaaatcttaaaatcatgacaaatctctttaaaggtgcg
ggatttgtgcagtatgtttcatccatttaccttcggcagctttgtgaccatgcgaatgta
cgctttcacaggatgacacgaaatcagctgagcctgcagctcaatgataacaatgaattt
gaaatcatcgattacctcaacgaaggccgcagcagaagcgtgaaaaccctatccggcgga
caggcctttcaggtctcgctgagtctggctctggcattggcagagagtgttcagagcaat
gcaaaagcggaaaaaaatttcttctttatcgatgaaggtttcgggacgcaggatctggaa
tcggtaaatattgtttttgaaacccttgtgaatcttcagaaagaaaacagaattgtgggc
atcatttcccatgtggaagagctgaaagaaaaaatccccgtatcgctgaacatcattaag
gatgaagaaaaaggcagccagattgaaattgtataa
DBGET
integrated database retrieval system
