Chryseobacterium nepalense: M0D58_17090
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Entry
M0D58_17090 CDS
T08142
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cnp
Chryseobacterium nepalense
Brite
KEGG Orthology (KO) [BR:
cnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnp03016
]
M0D58_17090
Enzymes [BR:
cnp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
M0D58_17090
Transfer RNA biogenesis [BR:
cnp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
M0D58_17090
Prokaryotic type
M0D58_17090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Lactamase_B_6
RTP
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UPQ75751
LinkDB
All DBs
Position
3778366..3779280
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AA seq
304 aa
AA seq
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MSTYLTILGFNSAIPTINSSPTAQFLEMEERSFLIDCGEGTQVQLRKAKAKFSRINHIFI
SHLHGDHCFGLPGLIASFRLLGRETPLHVYGPKGIKKMLETIFTITETHRGFEVVYHELD
KDYSEKIYEDNRVEVYTIPLDHRIYCNGYLFKEKPKERHLNMQEISKYKEIETCDYHNIK
AGKDFVLSDGYVLKNEILTTDPVPPVSYAFCSDTRYLENVIPVIKNVNVLYHESTFLHDL
KDMADYTGHTTAVEAAMIARKAEVGKLILGHFSNRYADLTVFTDEARTIFPNTFLPKALE
PVKI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacttatttaacgatattaggctttaattcggcaattcccaccatcaattcttct
cctaccgcacaattcctggaaatggaggaaaggtcttttctgattgattgtggagaagga
acacaggttcagctgagaaaagcaaaagcgaaattttcgagaattaatcatattttcatt
tcccatcttcacggagaccactgttttggtcttcccggccttattgcatctttccgtctt
ttaggaagagaaacaccgttgcatgtatacggaccgaagggaataaaaaaaatgctggaa
actatttttaccattaccgaaacccatcgcggttttgaagtggtttatcacgaactggat
aaggactattccgaaaaaatttatgaagacaaccgggtagaggtatacactattcctctt
gatcacaggatttattgcaacggatatctctttaaggaaaagcctaaagaaagacacctg
aatatgcaggaaatttcaaaatacaaagaaattgaaacctgcgattatcacaatattaag
gcaggaaaagattttgtgctgagcgatgggtatgttctcaaaaatgaaattcttacaaca
gatccggttcctccggtttcttatgcgttttgcagcgatacacgttatcttgaaaatgtg
attcccgtcattaaaaacgttaatgtcctttatcatgaatccacttttttacatgattta
aaggatatggcagattataccggacatacgaccgcagtggaagcagcaatgattgccaga
aaagctgaggtaggaaaacttattttaggacacttctcaaacaggtatgcagatcttaca
gtattcactgatgaagcaagaaccatctttccgaatactttcttaccgaaggcactggag
cctgtgaaaatttaa
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